PH01005167G0080's details annotation
1.Annotation
ICBR annotation: plant-specific domain TIGR01615 family protein, expressed
Blast result AT2G38820 : 2.60E-50
Blast annotation: Protein of unknown function (DUF506)
2.Location
Scaffold: PH01005167
Strand: -
| Region | Start | End |
| gene | 59156 | 64208 |
| mRNA | 59156 | 64208 |
| exon | 59156 | 60028 |
| exon | 60523 | 64208 |
| CDS | 59701 | 60028 |
| CDS | 60523 | 60569 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000200 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04720.11 | PDDEXK_6 | 57 | 272 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.