Annotation of co-expression genes

PH01005253G0070's details annotation

1.Annotation

ICBR annotation: zinc finger family protein, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01005253
Strand: +

RegionStartEnd
gene6303366197
mRNA6303366197
exon6303364703
exon6489064925
exon6566466197
CDS6470164703
CDS6489064925
CDS6566465960

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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