Annotation of co-expression genes

PH01005333G0010's details annotation

1.Annotation

ICBR annotation: glycylpeptide N-tetradecanoyltransferase 1, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01005333
Strand: +

RegionStartEnd
gene66457951
mRNA66457951
exon66457218
exon72887367
exon75527674
exon77527951
CDS69387218
CDS72887367
CDS75527674
CDS77527792

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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