PH01005698G0020's details annotation
1.Annotation
ICBR annotation: CAMK_KIN1/SNF1/Nim1_like.14 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Blast result AT5G57630 : 2.00E-108
Blast annotation: CBL-interacting protein kinase 21
2.Location
Scaffold: PH01005698
Strand: +
| Region | Start | End |
| gene | 25601 | 28720 |
| mRNA | 25601 | 28720 |
| exon | 25601 | 26410 |
| exon | 26504 | 26566 |
| exon | 26661 | 26732 |
| exon | 26830 | 26937 |
| exon | 27092 | 27163 |
| exon | 27273 | 27326 |
| exon | 27433 | 27558 |
| exon | 27645 | 27734 |
| exon | 27833 | 27973 |
| exon | 28074 | 28181 |
| exon | 28319 | 28390 |
| exon | 28486 | 28720 |
| CDS | 26249 | 26410 |
| CDS | 26504 | 26566 |
| CDS | 26661 | 26732 |
| CDS | 26830 | 26937 |
| CDS | 27092 | 27163 |
| CDS | 27273 | 27326 |
| CDS | 27433 | 27558 |
| CDS | 27645 | 27734 |
| CDS | 27833 | 27973 |
| CDS | 28074 | 28181 |
| CDS | 28319 | 28390 |
| CDS | 28486 | 28566 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 10 | 262 |
| PF03822.13 | NAF | 310 | 334 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0007165 | signal transduction |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.