PH01006315G0010's details annotation
1.Annotation
ICBR annotation: cytosolic Fe-S cluster assembling factor NBP35, putative, expressed
Blast result AT5G50960 : 3.40E-59
Blast annotation: nucleotide binding protein 35
2.Location
Scaffold: PH01006315
Strand: +
| Region | Start | End |
| gene | 134 | 1754 |
| mRNA | 134 | 1754 |
| exon | 134 | 1754 |
| CDS | 134 | 784 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000219 | TKL-Pl-6 (from iTAK) potassium_ion_transmembrane_transport bZIP Transcription_Regulator(from PlantTFDB) GH36 Glycoside_Hydrolases potassium ion transmembrane transporter activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10609.8 | ParA | 34 | 123 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.