PH01006350G0060's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G15780 : 1.20E-79
Blast annotation: -
2.Location
Scaffold: PH01006350
Strand: +
| Region | Start | End |
| gene | 25537 | 32661 |
| mRNA | 25537 | 32661 |
| exon | 25537 | 26824 |
| exon | 27670 | 27806 |
| exon | 28119 | 28460 |
| exon | 28642 | 28850 |
| exon | 31828 | 31914 |
| exon | 32013 | 32661 |
| CDS | 26545 | 26824 |
| CDS | 27670 | 27806 |
| CDS | 28119 | 28460 |
| CDS | 28642 | 28850 |
| CDS | 31828 | 31914 |
| CDS | 32013 | 32214 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.