PH01007461G0010's details annotation
1.Annotation
ICBR annotation: TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01007461
Strand: +
| Region | Start | End |
| gene | 314 | 1197 |
| mRNA | 314 | 1197 |
| exon | 314 | 571 |
| exon | 771 | 1197 |
| CDS | 314 | 571 |
| CDS | 771 | 854 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000012 | glutamyl-tRNA aminoacylation, tRNA aminoacylation, glutamate-tRNA ligase activity, ligase activity, forming aminoacyl-tRNA and related compounds, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.