Annotation of co-expression genes

PH01010962G0010's details annotation

1.Annotation

ICBR annotation: cytidine and deoxycytidylate deaminase zinc-binding region family protein, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01010962
Strand: +

RegionStartEnd
gene13275872
mRNA13275872
exon13271688
exon20322367
exon24972695
exon43525872
CDS14671688
CDS20322367
CDS24972695
CDS43525872

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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