Annotation of co-expression genes

PH01047384G0010's details annotation

1.Annotation

ICBR annotation: cytochrome P450, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01047384
Strand: +

RegionStartEnd
gene761591
mRNA761591
exon761591
CDS13741591

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000776oxidation-reduction process,
6-phosphofructokinase complex,
Stilbenoid,_diarylheptanoid_and_gingerol_biosynthesis
Polycyclic_aromatic_hydrocarbon_degradation
Aminobenzoate_degradation
Bisphenol_degradation
Limonene_and_pinene_degradation
iron ion binding,
heme binding,
electron carrier activity,
glucose-6-phosphate dehydrogenase activity,
diphosphate-fructose-6-phosphate 1-phosphotransferase activity,
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,
glucose metabolic process,
6-phosphofructokinase activity,
cofactor binding,
Pentose_phosphate_pathway
Fructose_and_mannose_metabolism
NADP binding,
NAD binding,

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0005506iron ion binding
GO:0009055electron carrier activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037heme binding
GO:0055114oxidation-reduction process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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