CFinderM000080's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
DNA replication, synthesis of RNA primer,0.005155766GO:0006269
CBM43 Carbohydrate-Binding_Modules0.007579996GFam
GH17 Glycoside_Hydrolases0.007579996GFam
DNA primase activity,0.012841542GO:0003896

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01001730G0280-- (-)
PH01002577G0260-- (-)
PH01002867G0140DNA primases;DNA primasesAT5G41880 (4.00E-58)
PH01003093G0210beta-1,3-glucanase 1AT3G57270 (6.80E-41)
PH01004528G0020ENTH/VHS/GAT family proteinAT4G32760 (9.90E-38)
PH01008266G0010E2F target gene 1AT2G40550 (5.80E-14)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000026phosphatidylinositol_dephosphorylation
GRF Transcription_Regulator(from PlantTFDB)
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides,
RLK-Pelle_LRR-Xb-1 (from iTAK)
nucleus,
details
CFinderM000076chromosome, centromeric region,
mitosis,
details
CFinderM000081chromosome, centromeric region,
GH17 Glycoside_Hydrolases
CBM43 Carbohydrate-Binding_Modules
mitosis,
details
CFinderM000454DNA replication, synthesis of RNA primer,
DNA primase activity,
details
CFinderM000558Whirly Transcription_Regulator(from PlantTFDB)
COPII_vesicle_coating
aminoacyl-tRNA hydrolase activity,
intracellular,
details
CFinderM000603Spliceosome
details
CFinderM001058RLK-Pelle_URK-1 (from iTAK)
NEK (from iTAK)
details
CFinderM001166DNA_replication
Nucleotide_excision_repair
Mismatch_repair
Riboflavin_metabolism
histone acetylation,
chromatin modification,
chromatin silencing at telomere,
details

4.Expression profilings