CFinderM000103's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
plant-type cell wall organization,2.33E-05GO:0009664
extracellular region,0.000295179GO:0005576
microtubule-based movement,0.029936724GO:0007018
microtubule associated complex,0.031548938GO:0005875

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000009G2460expansin A8AT2G40610 (1.00E-105)
PH01000065G2010basic helix-loop-helix (bHLH) DNA-binding family proteinAT5G39860 (3.10E-19)
PH01000561G0620Smg-4/UPF3 family proteinAT1G33980 (1.30E-76)
PH01001392G0440P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domainAT1G63640 (1.30E-93)
PH01001532G0270-- (-)
PH01002238G0310expansin A1AT1G69530 (6.00E-97)
PH01005690G0040Protein of unknown function, DUF642AT4G32460 (1.30E-56)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000002extracellular region,
plant-type cell wall organization,
sexual reproduction,
glycerol metabolic process,
details
CFinderM000013cellulose biosynthetic process,
cellulose synthase (UDP-forming) activity,
response to oxidative stress,
extracellular polysaccharide biosynthetic process,
hydrolase activity, hydrolyzing O-glycosyl compounds,
carbohydrate metabolic process,
details
CFinderM000157RNA_transport
mRNA_surveillance_pathway
details
CFinderM000161Methane_metabolism
Phenylalanine_metabolism
Phenylpropanoid_biosynthesis
response to oxidative stress,
peroxidase activity,
heme binding,
cellulose biosynthetic process,
details
CFinderM000342ERF Transcription_Regulator(from PlantTFDB)
AP2/ERF-ERF Transcription_Regulator(from iTAK)
details
CFinderM000378extracellular region,
sexual reproduction,
RNA_transport
mRNA_surveillance_pathway
details
CFinderM000469CCAAT-binding factor complex,
NF-YA Transcription_Regulator(from PlantTFDB)
response to biotic stimulus,
details
CFinderM000528RLK-Pelle_RLCK-XIII (from iTAK)
base-excision repair,
Base_excision_repair
DNA-3-methyladenine glycosylase activity,
details
CFinderM000529RLK-Pelle_Extensin (from iTAK)
RLK-Pelle_RLCK-XIII (from iTAK)
details
CFinderM000689hydrolase activity, acting on ester bonds,
lipid metabolic process,
hydrolase activity,
RLK-Pelle_Extensin (from iTAK)
lipase activity,
lipid transport,
details
CFinderM001601GH35 Glycoside_Hydrolases
details
CFinderM001609RNA_transport
mRNA_surveillance_pathway
details

4.Expression profilings