CFinderM000149's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
SET Transcription_Regulator(from iTAK)0.001619984GFam
DDT Transcription_Regulator(from iTAK)0.013719745GFam
GTnc GlycosylTransferases0.027311298GFam
mitochondrial inner membrane,0.029863965GO:0005743
exocyst,0.034869198GO:0000145

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000144G1350-AT2G19390 (4.00E-102)
PH01000549G0690PHD finger family proteinAT5G15540 (0.00E+00)
PH01000633G0070Helicase/SANT-associated, DNA binding proteinAT3G24880 (1.00E-140)
PH01000720G0310exocyst subunit exo70 family protein D1AT1G72470 (1.00E-147)
PH01000839G0460succinate dehydrogenase 5AT1G47420 (4.30E-60)
PH01000949G0040-AT5G59613 (1.20E-21)
PH01000957G0160metalloendopeptidases;zinc ion binding;DNA bindingAT5G35210 (6.70E-97)
PH01001016G0290-AT4G12700 (0.00E+00)
PH01001067G0330SET domain protein 2AT4G15180 (0.00E+00)
PH01001274G0440copper ion bindingAT4G12340 (1.80E-22)
PH01001363G0310Calcium-dependent lipid-binding (CaLB domain) family proteinAT1G05500 (3.50E-78)
PH01001608G0170-- (-)
PH01002552G0050-AT1G27595 (3.00E-156)
PH01002725G0150SET domain protein 2AT4G15180 (0.00E+00)
PH01002754G0140ADP/ATP carrier 3AT4G28390 (3.00E-151)
PH01004832G0100Helicase/SANT-associated, DNA binding proteinAT3G24870 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000111protein insertion into membrane,
ATP citrate synthase activity,
succinate-CoA ligase (ADP-forming) activity,
regulation_of_anion_transport
voltage-gated anion channel activity,
anion transport,
details
CFinderM000226DDT Transcription_Regulator(from iTAK)
glycolysis,
fructose-bisphosphate aldolase activity,
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Pentose_phosphate_pathway
Fructose_and_mannose_metabolism
Glycolysis_/_Gluconeogenesis
details
CFinderM000431Porphyrin_and_chlorophyll_metabolism
C2C2-Dof Transcription_Regulator(from iTAK)
HB-BELL Transcription_Regulator(from iTAK)
TRAF Transcription_Regulator(from iTAK)
Dof Transcription_Regulator(from PlantTFDB)
TALE Transcription_Regulator(from PlantTFDB)
oxygen-dependent protoporphyrinogen oxidase activity,
details
CFinderM000481proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
SNF2 Transcription_Regulator(from iTAK)
Phagosome
Oxidative_phosphorylation
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
RB Transcription_Regulator(from iTAK)
DDT Transcription_Regulator(from iTAK)
clathrin coat of trans-Golgi network vesicle,
clathrin coat of coated pit,
mediator complex,
PHD Transcription_Regulator(from iTAK)
details
CFinderM000519LIM Transcription_Regulator(from iTAK)
mitochondrial inner membrane,
details
CFinderM000660Phagosome
mitochondrial inner membrane,
GTnc GlycosylTransferases
details
CFinderM000957DDT Transcription_Regulator(from iTAK)
CMGC_CDK-PITSLRE (from iTAK)
HB-HD-ZIP Transcription_Regulator(from iTAK)
HD-ZIP Transcription_Regulator(from PlantTFDB)
plant-type cell wall organization,
Ether_lipid_metabolism
Endocytosis
Glycerophospholipid_metabolism
extracellular region,
details
CFinderM001035GT14 GlycosylTransferases
CAMTA Transcription_Regulator(from PlantTFDB)
microtubule,
protein complex,
RNA_degradation
Phagosome
details
CFinderM001238glycolysis,
fructose-bisphosphate aldolase activity,
Fructose_and_mannose_metabolism
Methane_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glycolysis_/_Gluconeogenesis
Pentose_phosphate_pathway
details
CFinderM001381CAMTA Transcription_Regulator(from PlantTFDB)
details
CFinderM001589PHD Transcription_Regulator(from iTAK)
fructose-bisphosphate aldolase activity,
glycolysis,
details
CFinderM001766proton-transporting ATP synthase complex, catalytic core F(1),
mitochondrial proton-transporting ATP synthase complex, catalytic core F(1),
proton-transporting two-sector ATPase complex, catalytic domain,
mitochondrial outer membrane,
ATP metabolic process,
anion transport,
ATP biosynthetic process,
ATP_catabolic_process
regulation_of_anion_transport
proton transport,
ATP synthesis coupled proton transport,
fructose-bisphosphate aldolase activity,
voltage-gated anion channel activity,
ATP hydrolysis coupled proton transport,
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances,
hydrogen ion transporting ATP synthase activity, rotational mechanism,
details

4.Expression profilings


Show details about module gene expression profiling