CFinderM000260's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Glycine,_serine_and_threonine_metabolism0.00206279KEGG
nucleus,0.007953898GO:0005634
Glyoxylate_and_dicarboxylate_metabolism0.027734747KEGG
RNA_degradation0.037162064KEGG
cofactor binding,0.04916056GO:0048037

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000162G0760methyl-CPG-binding domain 11AT3G15790 (2.40E-32)
PH01000291G1050-- (-)
PH01000732G0180Polynucleotidyl transferase, ribonuclease H-like superfamily proteinAT2G32070 (2.00E-115)
PH01000810G0650Galactose oxidase/kelch repeat superfamily proteinAT5G15710 (1.00E-166)
PH01000812G0630D-isomer specific 2-hydroxyacid dehydrogenase family proteinAT1G79870 (2.40E-61)
PH01001250G0330-- (-)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000302nucleosome assembly,
nucleosome,
protein_heterodimerization_activity
LBD Transcription_Regulator(from PlantTFDB)
RNA_degradation
nucleic acid binding,
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM001664MYB_related Transcription_Regulator(from PlantTFDB)
GRAS Transcription_Regulator(from PlantTFDB)
details

4.Expression profilings