CFinderM000349's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
chromatin assembly or disassembly,0.00124959GO:0006333
HMG Transcription_Regulator(from iTAK)0.004367418GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000024G1340anti- silencing function 1bAT5G38110 (4.20E-77)
PH01000052G1410-- (-)
PH01000094G0910ubiquitin-conjugating enzyme19AT3G20060 (1.20E-49)
PH01000108G0820-AT5G67390 (5.30E-12)
PH01000370G0900-- (-)
PH01000447G0740high mobility group B3AT1G20696 (6.50E-20)
PH01000511G0620Transducin family protein / WD-40 repeat family proteinAT4G35050 (1.40E-77)
PH01000985G0560Chaperone DnaJ-domain superfamily proteinAT5G49580 (1.00E-153)
PH01002626G0120-AT4G28230 (3.70E-10)
PH01008628G0020F-box/RNI-like superfamily proteinAT1G10780 (8.00E-117)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000010Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_biosynthesis
fatty acid metabolic process,
acyl-[acyl-carrier-protein] desaturase activity,
transition metal ion binding,
details
CFinderM000029B3 Transcription_Regulator(from PlantTFDB)
HMG Transcription_Regulator(from iTAK)
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
regulation_of_cell_cycle
details
CFinderM000056HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_biosynthesis
nucleus,
transition metal ion binding,
acyl-[acyl-carrier-protein] desaturase activity,
fatty acid metabolic process,
lipid biosynthetic process,
sequence-specific DNA binding,
DNA binding,
sequence-specific DNA binding transcription factor activity,
fatty acid biosynthetic process,
YABBY Transcription_Regulator(from PlantTFDB)
C2C2-YABBY Transcription_Regulator(from iTAK)
lipase activity,
Rho GDP-dissociation inhibitor activity,
details
CFinderM000261protein_heterodimerization_activity
NF-YB Transcription_Regulator(from PlantTFDB)
nucleosome assembly,
GRAS Transcription_Regulator(from PlantTFDB)
nucleosome,
Base_excision_repair
Nucleotide_excision_repair
DNA_replication
details

4.Expression profilings


Show details about module gene expression profiling