CFinderM000413's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
extrinsic to membrane,0.017803647GO:0019898
photosystem II,0.017803647GO:0009523
oxygen evolving complex,0.017803647GO:0009654

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000002G4340Photosystem II reaction center PsbP family proteinAT3G05410 (1.60E-81)
PH01000010G3140Heavy metal transport/detoxification superfamily protein AT5G03380 (1.60E-23)
PH01000024G1530-AT3G03280 (3.10E-22)
PH01000171G1160myb-like transcription factor family proteinAT5G47390 (1.00E-84)
PH01000296G0390WRKY DNA-binding protein 33AT2G38470 (1.10E-84)
PH01000627G0550-- (-)
PH01001528G0080poltergeist like 4AT2G28890 (6.00E-141)
PH01002335G0130poltergeist like 4AT2G28890 (4.00E-141)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000364GRAS Transcription_Regulator(from PlantTFDB)
oxygen evolving complex,
phosphopyruvate hydratase complex,
extrinsic to membrane,
photosystem II,
phosphopyruvate hydratase activity,
Glycolysis_/_Gluconeogenesis
Methane_metabolism
RNA_degradation
details
CFinderM000612photosystem II,
extrinsic to membrane,
oxygen evolving complex,
RLK-Pelle_DLSV (from iTAK)
ubiquitin ligase complex,
details
CFinderM001385cytoskeleton,
regulation of actin filament polymerization,
carbon-sulfur lyase activity,
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
RNA_transport
details
CFinderM001392nuclear origin of replication recognition complex,
Terpenoid_backbone_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
isoprenoid biosynthetic process,
DNA_replication
protein dephosphorylation,
details

4.Expression profilings