CFinderM000760's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_CLK (from iTAK)0.006744939GFam
cullin-RING ubiquitin ligase complex,0.020817659GO:0031461
cytoplasm,0.020817659GO:0005737
SET Transcription_Regulator(from iTAK)0.020967603GFam

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000020G0430FUS3-complementing gene 2AT4G24740 (3.00E-130)
PH01000496G0220peroxisomal NAD-malate dehydrogenase 2AT5G09660 (7.80E-94)
PH01000502G0840heat shock protein 60AT3G23990 (5.40E-45)
PH01000558G0660histone-lysine N-methyltransferase ATXR2AT3G21820 (1.10E-77)
PH01000863G0580cullin 1AT4G02570 (4.20E-71)
PH01001075G0490glycyl-tRNA synthetase / glycine--tRNA ligaseAT1G29880 (0.00E+00)
PH01002013G0170eukaryotic translation initiation factor 2 gamma subunitAT1G04170 (1.00E-53)
PH01002328G0180proteasome family proteinAT2G19560 (3.00E-105)
PH01002459G0300galactosyltransferase1AT1G26810 (3.30E-43)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000256signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
details
CFinderM000734WASH_complex
cytoskeleton,
phagocytosis,
malate metabolic process,
cellular carbohydrate metabolic process,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
details
CFinderM000780Lysine_degradation
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
SET Transcription_Regulator(from iTAK)
endoplasmic reticulum membrane,
GPI anchor biosynthetic process,
protein refolding,
details
CFinderM000898WASH_complex
cullin-RING ubiquitin ligase complex,
PHD Transcription_Regulator(from iTAK)
mitotic_spindle_assembly_checkpoint
ubiquitin protein ligase binding,
cysteine-type peptidase activity,
protein serine/threonine phosphatase activity,
details
CFinderM001081proteasome complex,
regulation of protein catabolic process,
enzyme regulator activity,
Rcd1-like Transcription_Regulator(from iTAK)
Proteasome
binding,
transcription factor TFIID complex,
glycyl-tRNA aminoacylation,
RLK-Pelle_LRR-XII-1 (from iTAK)
glycine-tRNA ligase activity,
details
CFinderM001253CMGC_CLK (from iTAK)
membrane,
details
CFinderM001360cysteine-type peptidase activity,
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001402phosphatidylinositol-mediated signaling,
RNA 3'-end processing,
RNA polyadenylation,
phosphatidylinositol_biosynthetic_process
phosphatidylinositol phosphorylation,
1-phosphatidylinositol_4-kinase_activity
Inositol_phosphate_metabolism
Phosphatidylinositol_signaling_system
mRNA_surveillance_pathway
polynucleotide adenylyltransferase activity,
details

4.Expression profilings


Show details about module gene expression profiling