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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | CAMK_CAMKL-CHK1 (from iTAK) | 0.009341217 | GFam | | integral to membrane, | 0.010256665 | GO:0016021 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000009G2840 | CBL-interacting protein kinase 2 | AT5G07070 (3.00E-135) | | PH01000109G0650 | Vps51/Vps67 family (components of vesicular transport) protein | AT5G16300 (0.00E+00) | | PH01000326G0320 | ATP binding cassette subfamily B4 | AT2G47000 (0) | | PH01000840G0130 | nucleotide sugar transporter-KT 1 | AT4G39390 (1.90E-54) | | PH01001540G0430 | poltergeist like 1 | AT2G35350 (1.20E-71) | | PH01002397G0060 | Endomembrane protein 70 protein family | AT2G24170 (0.00E+00) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000740 | Phenylalanine,_tyrosine_and_tryptophan_biosynthesis
CAMK_CAMKL-CHK1 (from iTAK)
shikimate 3-dehydrogenase (NADP+) activity,
3-dehydroquinate dehydratase activity,
intracellular protein transport,
membrane coat,
clathrin adaptor complex,
COPII vesicle coat,
| details | | CFinderM000805 | Sulfur_metabolism
cysteine biosynthetic process from serine,
peptide-methionine-(S)-S-oxide reductase activity,
cysteine synthase activity,
Cysteine_and_methionine_metabolism
cellulose biosynthetic process,
chaperone binding,
cellulose synthase (UDP-forming) activity,
| details | | CFinderM001373 | GTnc GlycosylTransferases
phospholipid transport,
cellular metabolic process,
cation transport,
| details | | CFinderM001652 | mRNA_cleavage_factor_complex
GT31 GlycosylTransferases
mRNA_polyadenylation
mRNA_binding
mRNA_surveillance_pathway
protein glycosylation,
cellulose biosynthetic process,
membrane,
| details |
4.Expression profilings |
