CFinderM000879's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Alanine,_aspartate_and_glutamate_metabolism0.000375053KEGG
GNAT Transcription_Regulator(from iTAK)0.00486655GFam
protein retention in ER lumen,0.005060443GO:0006621
nitrogen compound metabolic process,0.008140204GO:0006807
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,0.008242138GO:0016810
ER retention sequence binding,0.008242138GO:0046923
N-acetyltransferase_activity0.012343902GO:0008080

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000113G1420Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family proteinAT5G12040 (5.00E-129)
PH01000207G1000-- (-)
PH01000816G0010-- (-)
PH01001121G0400endoplasmic reticulum retention defective 2BAT3G25040 (2.40E-97)
PH01001480G0200-AT4G22830 (7.40E-33)
PH01146842G0010Acyl-CoA N-acyltransferases (NAT) superfamily proteinAT1G72030 (1.20E-32)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000979signal recognition particle,
SRP-dependent cotranslational protein targeting to membrane,
RNA metabolic process,
Protein_export
7S RNA binding,
RNA_transport
details
CFinderM001451Protein_processing_in_endoplasmic_reticulum
Protein_export
mitosis,
protein retention in ER lumen,
ER retention sequence binding,
spliceosomal complex,
glycerol ether metabolic process,
isomerase activity,
details
CFinderM001554protein retention in ER lumen,
ER retention sequence binding,
peptidyl-prolyl cis-trans isomerase activity,
acid-amino acid ligase activity,
details
CFinderM001555protein retention in ER lumen,
RLK-Pelle_DLSV (from iTAK)
ER retention sequence binding,
details
CFinderM001678mRNA_cleavage_and_polyadenylation_specificity_factor_complex
mRNA cleavage,
protein retention in ER lumen,
mRNA_polyadenylation
RNA metabolic process,
regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity
ER retention sequence binding,
details

4.Expression profilings