CFinderM000884's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Protein_processing_in_endoplasmic_reticulum0.003847225KEGG
GT48 GlycosylTransferases0.010993297GFam
HB-other Transcription_Regulator(from PlantTFDB)0.015092655GFam
HD-ZIP Transcription_Regulator(from PlantTFDB)0.023704482GFam
Nucleotide_excision_repair0.024208796KEGG
proteasomal ubiquitin-dependent protein catabolic process,0.027214365GO:0043161
outer membrane-bounded periplasmic space,0.035589109GO:0030288
1,3-beta-D-glucan synthase complex,0.035589109GO:0000148
(1->3)-beta-D-glucan biosynthetic process,0.03771926GO:0006075
nucleotide-excision repair,0.03771926GO:0006289

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000166G1030glucan synthase-like 7AT1G06490 (0.00E+00)
PH01000444G0820agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing proteinAT1G68580 (3.10E-44)
PH01000486G0200glutamate receptor 2.8AT2G29110 (6.60E-88)
PH01000564G0790PDI-like 5-2AT1G35620 (1.00E-127)
PH01000592G0690Domain of unknown function (DUF1767)AT5G19950 (6.70E-69)
PH01000675G0560-- (-)
PH01000718G0250homeobox protein 40AT4G36740 (1.20E-31)
PH01006740G0010Rad23 UV excision repair protein familyAT5G38470 (6.00E-117)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000093NAC Transcription_Regulator(from PlantTFDB)
GH79 Glycoside_Hydrolases
DBB Transcription_Regulator(from PlantTFDB)
details
CFinderM001040proteasomal ubiquitin-dependent protein catabolic process,
nucleotide-excision repair,
chloride transport,
damaged DNA binding,
ion channel activity,
voltage-gated chloride channel activity,
Nucleotide_excision_repair
details
CFinderM001121HB-other Transcription_Regulator(from PlantTFDB)
transcription_regulatory_region_sequence-specific_DNA_binding
HD-ZIP Transcription_Regulator(from PlantTFDB)
regulation of transcription, DNA-dependent,
NAC Transcription_Regulator(from PlantTFDB)
DNA binding,
sequence-specific DNA binding,
sequence-specific DNA binding transcription factor activity,
Rab GTPase activator activity,
Glyoxylate_and_dicarboxylate_metabolism
Citrate_cycle_(TCA_cycle)
Lysine_biosynthesis
Carbon_fixation_pathways_in_prokaryotes
regulation of Rab GTPase activity,
nucleus,
details
CFinderM001217Regulation_of_autophagy
details
CFinderM001388Protein_processing_in_endoplasmic_reticulum
GT48 GlycosylTransferases
Nucleotide_excision_repair
outer membrane-bounded periplasmic space,
1,3-beta-D-glucan synthase complex,
proteasomal ubiquitin-dependent protein catabolic process,
(1->3)-beta-D-glucan biosynthetic process,
nucleotide-excision repair,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
glycerol ether metabolic process,
details
CFinderM001389outer membrane-bounded periplasmic space,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Protein_processing_in_endoplasmic_reticulum
details
CFinderM001499Glutathione_metabolism
metallopeptidase activity,
ionotropic glutamate receptor activity,
extracellular-glutamate-gated ion channel activity,
outer membrane-bounded periplasmic space,
details

4.Expression profilings