CFinderM000908's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
barrier_septum_assembly0.014055469GO:0000917
Phosphatidylinositol_signaling_system0.015366643KEGG
nucleosome,0.019520948GO:0000786

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000007G1740P-loop containing nucleoside triphosphate hydrolases superfamily proteinAT2G22870 (6.00E-102)
PH01000029G1340calmodulin 1AT5G37780 (5.60E-77)
PH01000078G1690cyclophilin 20-2AT5G13120 (2.30E-88)
PH01000225G1160Calcium-binding EF hand family proteinAT1G64850 (4.10E-48)
PH01000410G0420SIT4 phosphatase-associated family proteinAT1G30470 (5.00E-177)
PH01000561G0770F-box/RNI-like superfamily proteinAT4G13960 (3.10E-10)
PH01000707G0640CAX interacting protein 1AT3G54900 (1.00E-46)
PH01001001G0190-AT1G10522 (1.30E-27)
PH01003165G0160-AT5G15802 (1.00E-31)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000056HD-ZIP Transcription_Regulator(from PlantTFDB)
HB-HD-ZIP Transcription_Regulator(from iTAK)
Biosynthesis_of_unsaturated_fatty_acids
Fatty_acid_biosynthesis
nucleus,
transition metal ion binding,
acyl-[acyl-carrier-protein] desaturase activity,
fatty acid metabolic process,
lipid biosynthetic process,
sequence-specific DNA binding,
DNA binding,
sequence-specific DNA binding transcription factor activity,
fatty acid biosynthetic process,
YABBY Transcription_Regulator(from PlantTFDB)
C2C2-YABBY Transcription_Regulator(from iTAK)
lipase activity,
Rho GDP-dissociation inhibitor activity,
details
CFinderM000072TCP Transcription_Regulator(from PlantTFDB)
ATPase activator activity,
nucleosome,
trehalose biosynthetic process,
nucleosome assembly,
chaperone binding,
details
CFinderM000220phospholipid metabolic process,
N-methyltransferase activity,
Phosphatidylinositol_signaling_system
phosphoglycolate phosphatase activity,
details
CFinderM000302nucleosome assembly,
nucleosome,
protein_heterodimerization_activity
LBD Transcription_Regulator(from PlantTFDB)
RNA_degradation
nucleic acid binding,
details
CFinderM000354chromosome,
DNA metabolic process,
details
CFinderM000428Sulfur_relay_system
Folate_biosynthesis
Mo-molybdopterin cofactor biosynthetic process,
nucleosome,
nucleosome assembly,
details

4.Expression profilings


Show details about module gene expression profiling