|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | MBF1 Transcription_Regulator(from iTAK) | 0.000999828 | GFam | | RNA_degradation | 0.026934402 | KEGG |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000013G1920 | - | AT4G16180 (0.00E+00) | | PH01000362G0780 | UBX domain-containing protein | AT4G10790 (2.30E-44) | | PH01000394G0380 | Tetratricopeptide repeat (TPR)-like superfamily protein | AT5G35430 (6.00E-122) | | PH01001004G0380 | SIT4 phosphatase-associated family protein | AT1G30470 (0.00E+00) | | PH01001362G0300 | SIT4 phosphatase-associated family protein | AT1G30470 (0.00E+00) | | PH01001650G0180 | Leucine-rich repeat (LRR) family protein | AT3G50690 (6.50E-58) | | PH01002419G0160 | multiprotein bridging factor 1A | AT2G42680 (5.70E-63) | | PH01002968G0010 | ABI five binding protein 2 | AT1G13740 (1.40E-39) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000190 | pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
methionine adenosyltransferase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
aminopeptidase activity,
serine-type peptidase activity,
FMN binding,
| details | | CFinderM000195 | pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
proteolysis,
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
Endocytosis
aminopeptidase activity,
| details | | CFinderM000206 | mitochondrial inner membrane presequence translocase complex,
P-P-bond-hydrolysis-driven protein transmembrane transporter activity,
Others Transcription_Regulator(from iTAK)
two-component response regulator activity,
Protein_processing_in_endoplasmic_reticulum
| details | | CFinderM000219 | TKL-Pl-6 (from iTAK)
potassium_ion_transmembrane_transport
bZIP Transcription_Regulator(from PlantTFDB)
GH36 Glycoside_Hydrolases
potassium ion transmembrane transporter activity,
| details | | CFinderM000296 | aspartic-type endopeptidase activity,
proteolysis,
drug transmembrane transport,
drug transmembrane transporter activity,
antiporter activity,
| details | | CFinderM000324 | pyridoxine biosynthetic process,
S-adenosylmethionine_biosynthetic_process
GT8 GlycosylTransferases
pyridoxamine-phosphate oxidase activity,
oxidoreductase activity, acting on the CH-NH2 group of donors,
methionine adenosyltransferase activity,
| details | | CFinderM000333 | protein arginylation,
RNA_polymerase_complex
arginyltransferase activity,
transcription, DNA-dependent,
DNA-directed RNA polymerase activity,
| details | | CFinderM000360 | protein arginylation,
arginyltransferase activity,
RNA_degradation
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
| details | | CFinderM000448 | COPII vesicle coat,
Protein_processing_in_endoplasmic_reticulum
Protein_export
| details | | CFinderM000520 | ER_membrane_protein_complex
GT96 GlycosylTransferases
TKL-Pl-4 (from iTAK)
| details | | CFinderM000802 | bZIP Transcription_Regulator(from PlantTFDB)
CMGC_CDK-CDK8 (from iTAK)
RNA_degradation
Plant_hormone_signal_transduction
regulation of transcription, DNA-dependent,
sequence-specific DNA binding,
| details | | CFinderM000937 | | details | | CFinderM001063 | CMGC_CDK-CDK8 (from iTAK)
protein arginylation,
arginyltransferase activity,
RNA_degradation
| details | | CFinderM001090 | GT14 GlycosylTransferases
proteolysis,
membrane,
aminopeptidase activity,
| details | | CFinderM001235 | ubiquitin ligase complex,
protein ubiquitination,
binding,
Ubiquitin_mediated_proteolysis
RNA_degradation
| details | | CFinderM001644 | ER_membrane_protein_complex
RNA_degradation
| details |
4.Expression profilings |
