CFinderM001051's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cellular protein modification process,0.008502504GO:0006464
binding,0.024982286GO:0005488

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000003G2020-- (-)
PH01000093G1180bindingAT1G58230 (0.00E+00)
PH01000310G0670-- (-)
PH01001107G0540-AT5G62865 (6.20E-18)
PH01001117G0190-AT3G12590 (0.00E+00)
PH01001373G0170HEAT repeat ;HECT-domain (ubiquitin-transferase)AT4G38600 (0)
PH01006475G0010SIN3-like 4AT1G70060 (1.00E-126)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000428Sulfur_relay_system
Folate_biosynthesis
Mo-molybdopterin cofactor biosynthetic process,
nucleosome,
nucleosome assembly,
details
CFinderM000545binding,
SNF2 Transcription_Regulator(from iTAK)
helicase activity,
ubiquitin-protein ligase activity,
cellular protein modification process,
TOR_signaling
nucleic acid binding,
TORC1_complex
DNA binding,
hydrolase_activity,_acting_on_acid_anhydrides
RNA metabolic process,
RNA_transport
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay,
Ubiquitin_mediated_proteolysis
nucleotide binding,
RNA binding,
ATP binding,
protein binding,
details
CFinderM000870cullin-RING ubiquitin ligase complex,
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
details
CFinderM000982RNA_degradation
folic acid-containing compound biosynthetic process,
methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity
cullin-RING ubiquitin ligase complex,
details
CFinderM001603GT41 GlycosylTransferases
mitochondrial electron transport, ubiquinol to cytochrome c,
mitochondrial envelope,
mitochondrial_respiratory_chain_complex_III
Other_types_of_O-glycan_biosynthesis
Oxidative_phosphorylation
details
CFinderM001813GT48 GlycosylTransferases
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
1,3-beta-D-glucan synthase complex,
S-adenosylmethionine-dependent methyltransferase activity,
cytochrome-c oxidase activity,
steroid biosynthetic process,
(1->3)-beta-D-glucan biosynthetic process,
metabolic process,
RNA_degradation
Oxidative_phosphorylation
cellular metabolic process,
details

4.Expression profilings