CFinderM001167's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
RNA_transport0.001031395KEGG
Alanine,_aspartate_and_glutamate_metabolism0.001031395KEGG
eukaryotic translation initiation factor 3 complex,0.013478707GO:0005852
IMP biosynthetic process,0.021960052GO:0006188
purine ribonucleotide biosynthetic process,0.021960052GO:0009152
multicellular organismal development,0.025608052GO:0007275
translation_initiation_factor_binding0.030421329GO:0031369
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity,0.030421329GO:0004018
bHLH Transcription_Regulator(from PlantTFDB)0.046921837GFam
translational initiation,0.047936373GO:0006413
Purine_metabolism0.049296983KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000019G1940-- (-)
PH01000039G1740NagB/RpiA/CoA transferase-like superfamily proteinAT5G38640 (6.00E-164)
PH01000733G0640L-Aspartase-like family proteinAT4G18440 (0.00E+00)
PH01000996G0480translation initiation factor 3B1AT5G27640 (0.00E+00)
PH01001890G0330TRAF-like superfamily proteinAT5G53360 (5.00E-107)
PH01004029G0130DNA polymerase V familyAT5G64420 (9.00E-89)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000677UMP biosynthetic process,
'de novo' pyrimidine base biosynthetic process,
purine ribonucleotide biosynthetic process,
histidyl-tRNA aminoacylation,
Alanine,_aspartate_and_glutamate_metabolism
IMP biosynthetic process,
dihydroorotate oxidase activity,
dihydroorotate dehydrogenase activity,
translation_initiation_factor_binding
N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity,
histidine-tRNA ligase activity,
nucleotide-excision repair,
proteolysis,
ATP-dependent DNA helicase activity,
translational initiation,
nucleobase-containing compound metabolic process,
RNA-dependent DNA replication,
details

4.Expression profilings