|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | TKL-Pl-4 (from iTAK) | 0.010639522 | GFam | | intracellular, | 0.016782095 | GO:0005622 | | ribosome biogenesis, | 0.04470824 | GO:0042254 |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000110G0940 | putative mitochondrial RNA helicase 2 | AT3G22330 (2.00E-158) | | PH01000171G0750 | - | AT4G17540 (9.80E-40) | | PH01000183G0790 | Transducin/WD40 repeat-like superfamily protein | AT4G21130 (9.10E-75) | | PH01000371G0670 | CDK inhibitor P21 binding protein | AT2G44510 (8.80E-65) | | PH01000433G0930 | Ribosomal protein L10 family protein | AT1G25260 (9.30E-81) | | PH01000996G0070 | Transducin/WD40 repeat-like superfamily protein | AT4G05410 (1.40E-86) | | PH01002571G0200 | - | AT4G17540 (9.60E-21) | | PH01004916G0040 | Protein kinase superfamily protein | AT5G58950 (6.40E-81) | | PH01005790G0030 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | AT5G60980 (1.40E-79) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000807 | E2F/DP Transcription_Regulator(from PlantTFDB)
E2F-DP Transcription_Regulator(from iTAK)
transcription factor complex,
glycerol-3-phosphate dehydrogenase complex,
Glycerophospholipid_metabolism
glycerol-3-phosphate catabolic process,
glycerol-3-phosphate metabolic process,
glycerol-3-phosphate dehydrogenase [NAD+] activity,
| details | | CFinderM000869 | Glycerophospholipid_metabolism
glycerol-3-phosphate metabolic process,
glycerol-3-phosphate catabolic process,
glycerol-3-phosphate dehydrogenase complex,
protein methylation,
glycerol-3-phosphate dehydrogenase [NAD+] activity,
| details | | CFinderM000940 | nucleic acid binding,
Ribosome_biogenesis_in_eukaryotes
| details | | CFinderM001031 | intracellular,
translation,
structural constituent of ribosome,
protein import into mitochondrial inner membrane,
Ribosome
RLK-Pelle_L-LEC (from iTAK)
large ribosomal subunit,
ribosome biogenesis,
| details | | CFinderM001282 | protein methylation,
intracellular,
methyltransferase activity,
nucleotide binding,
nucleic acid binding,
IWS1 Transcription_Regulator(from iTAK)
ribosome biogenesis,
transport,
| details | | CFinderM001646 | Tify Transcription_Regulator(from iTAK)
mRNA_catabolic_process
polyribonucleotide_nucleotidyltransferase_activity
3'-5'-exoribonuclease activity,
RNA processing,
| details |
4.Expression profilings |
