CFinderM001307's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
pseudouridine synthesis,0.017809014GO:0001522
RNA modification,0.017809014GO:0009451
protein kinase C-activating G-protein coupled receptor signaling pathway,0.017809014GO:0007205
RNA processing,0.036208539GO:0006396
pseudouridine synthase activity,0.039716515GO:0009982
NAD+ kinase activity,0.039716515GO:0003951
diacylglycerol kinase activity,0.039716515GO:0004143
Starch_and_sucrose_metabolism0.040883839KEGG
Amino_sugar_and_nucleotide_sugar_metabolism0.040883839KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000055G0860diacylglycerol kinase 5AT2G20900 (0.00E+00)
PH01000100G0180RING/U-box superfamily proteinAT2G14835 (2.60E-73)
PH01000276G0160galacturonosyltransferase 1AT3G61130 (0.00E+00)
PH01000383G0720Plant VAMP (vesicle-associated membrane protein) family proteinAT4G00170 (1.50E-54)
PH01000918G0720Pseudouridine synthase family proteinAT5G14460 (6.00E-132)
PH01001599G0330methyltransferasesAT2G21070 (2.00E-140)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000876GTPase activity,
GTP binding,
cellulose biosynthetic process,
ubiquitin-dependent protein catabolic process,
cellulose synthase (UDP-forming) activity,
ubiquitin thiolesterase activity,
structural molecule activity,
details
CFinderM001308microtubule associated complex,
pseudouridine synthesis,
RNA modification,
RNA processing,
microtubule-based movement,
details
CFinderM001497COPII vesicle coat,
ER to Golgi vesicle-mediated transport,
Protein_processing_in_endoplasmic_reticulum
signal transducer activity,
ubiquitin thiolesterase activity,
structural molecule activity,
protein binding,
transferase activity, transferring glycosyl groups,
details
CFinderM001563details
CFinderM001626Golgi apparatus,
membrane coat,
clathrin adaptor complex,
Amino_sugar_and_nucleotide_sugar_metabolism
Starch_and_sucrose_metabolism
details

4.Expression profilings