CFinderM001616's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
intra-Golgi vesicle-mediated transport,0.003905884GO:0006891
Golgi organization,0.003905884GO:0007030
Golgi_transport_complex0.008247292GO:0017119
mRNA_surveillance_pathway0.021928485KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000007G2390-AT1G31780 (0.00E+00)
PH01000019G2080signal peptide peptidaseAT2G03120 (1.00E-140)
PH01000300G0580gamma-soluble NSF attachment proteinAT4G20410 (6.10E-83)
PH01000512G0150global transcription factor group E4AT1G06230 (1.10E-80)
PH01000581G0690-AT1G27595 (1.00E-164)
PH01002084G0040-AT4G24840 (3.00E-121)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000763retromer complex,
Golgi_transport_complex
intra-Golgi vesicle-mediated transport,
vacuolar transport,
RNA-dependent DNA replication,
details
CFinderM000972solute:hydrogen antiporter activity,
GT31 GlycosylTransferases
cation transport,
rRNA methyltransferase activity,
magnesium_ion_transport
rRNA processing,
transmembrane transport,
magnesium_ion_transmembrane_transporter_activity
galactosyltransferase activity,
protein glycosylation,
details
CFinderM001034STE_STE20-YSK (from iTAK)
protein phosphatase type 2A complex,
glycolipid_6-alpha-mannosyltransferase_activity
GDP-Man:Man1GlcNAc2-PP-Dol_alpha-1,3-mannosyltransferase_activity
C3H Transcription_Regulator(from PlantTFDB)
details
CFinderM001115vacuolar_proton-transporting_V-type_ATPase,_V0_domain
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
Oxidative_phosphorylation
Phagosome
details
CFinderM001348retrograde vesicle-mediated transport, Golgi to ER,
glycolipid transport,
COPI vesicle coat,
clathrin adaptor complex,
glycolipid binding,
glycolipid transporter activity,
MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
details
CFinderM001608pyruvate dehydrogenase complex,
dihydrolipoyllysine-residue acetyltransferase activity,
pyruvate metabolic process,
protein processing,
small-subunit processome,
integral to membrane,
transferase activity, transferring acyl groups,
mRNA_surveillance_pathway
Pyruvate_metabolism
Glycolysis_/_Gluconeogenesis
Citrate_cycle_(TCA_cycle)
details
CFinderM001617Golgi organization,
mRNA_surveillance_pathway
solute:hydrogen antiporter activity,
integral to membrane,
details

4.Expression profilings