CFinderM001649's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
CMGC_CDK-PITSLRE (from iTAK)0.002530222GFam
LUG Transcription_Regulator(from iTAK)0.002530222GFam
sphingolipid metabolic process,0.006186436GO:0006665
glucosylceramidase activity,0.037364556GO:0004348

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000020G1700Protein kinase superfamily proteinAT1G67580 (0.00E+00)
PH01000027G0920suppressor of abi3-5AT3G54230 (4.00E-180)
PH01000784G0480KOW domain-containing proteinAT5G23535 (5.30E-61)
PH01001076G0500ENHANCED DOWNY MILDEW 2AT5G55390 (4.00E-153)
PH01003290G0050LEUNIG_homologAT2G32700 (4.40E-80)
PH01042610G0010Beta-glucosidase, GBA2 type family proteinAT3G24180 (2.00E-153)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000256signal recognition particle,
proton-transporting two-sector ATPase complex, proton-transporting domain,
details
CFinderM000537Ribosome
eukaryotic translation initiation factor 3 complex,
details
CFinderM000910translation,
phosphopyruvate hydratase complex,
Ribosome
intracellular,
small ribosomal subunit,
phosphopyruvate hydratase activity,
structural constituent of ribosome,
glycolysis,
Methane_metabolism
RNA_degradation
Glycolysis_/_Gluconeogenesis
details
CFinderM000957DDT Transcription_Regulator(from iTAK)
CMGC_CDK-PITSLRE (from iTAK)
HB-HD-ZIP Transcription_Regulator(from iTAK)
HD-ZIP Transcription_Regulator(from PlantTFDB)
plant-type cell wall organization,
Ether_lipid_metabolism
Endocytosis
Glycerophospholipid_metabolism
extracellular region,
details
CFinderM001439CAMTA Transcription_Regulator(from PlantTFDB)
sphingolipid metabolic process,
glucosylceramidase activity,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
details
CFinderM001595dephosphorylation,
Butanoate_metabolism
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
details
CFinderM001650sphingolipid metabolic process,
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
glucosylceramidase activity,
Butanoate_metabolism
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
serine-type carboxypeptidase activity,
nucleotidyltransferase activity,
details
CFinderM001675GT47 GlycosylTransferases
dephosphorylation,
Butanoate_metabolism
oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,
Pyruvate_metabolism
Citrate_cycle_(TCA_cycle)
Glycolysis_/_Gluconeogenesis
details
CFinderM001828ARID Transcription_Regulator(from iTAK)
ion transport,
intracellular,
details

4.Expression profilings