|
1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | GH10 Glycoside_Hydrolases | 0.00168721 | GFam | | CBM22 Carbohydrate-Binding_Modules | 0.00168721 | GFam |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000120G1040 | ubiquitin family protein | AT3G13235 (2.00E-154) | | PH01000418G0580 | Plant protein of unknown function (DUF641) | AT2G45260 (1.00E-157) | | PH01000578G0340 | - | AT1G35220 (0.00E+00) | | PH01001333G0220 | transmembrane nine 1 | AT1G10950 (0) | | PH01001440G0020 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | AT1G10050 (0.00E+00) | | PH01001453G0030 | Glutaredoxin family protein | AT5G01420 (3.70E-26) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000263 | Spliceosome
HRT-like Transcription_Regulator(from PlantTFDB)
HRT Transcription_Regulator(from iTAK)
nucleotide binding,
nucleic acid binding,
serine-type endopeptidase activity,
| details | | CFinderM000681 | protein arginylation,
GH47 Glycoside_Hydrolases
arginyltransferase activity,
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity,
Various_types_of_N-glycan_biosynthesis
N-Glycan_biosynthesis
| details | | CFinderM000719 | NAK (from iTAK)
Glycerophospholipid_metabolism
| details | | CFinderM001150 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
nucleosome,
| details | | CFinderM001192 | HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
isocitrate metabolic process,
PHD Transcription_Regulator(from iTAK)
COPI vesicle coat,
membrane coat,
Glutathione_metabolism
Citrate_cycle_(TCA_cycle)
Carbon_fixation_pathways_in_prokaryotes
Peroxisome
isocitrate dehydrogenase (NADP+) activity,
| details | | CFinderM001193 | HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
integral to membrane,
| details | | CFinderM001430 | HRT Transcription_Regulator(from iTAK)
HRT-like Transcription_Regulator(from PlantTFDB)
GH10 Glycoside_Hydrolases
CBM22 Carbohydrate-Binding_Modules
hydrolase activity, acting on glycosyl bonds,
| details | | CFinderM001605 | isocitrate metabolic process,
isocitrate dehydrogenase (NADP+) activity,
Carbon_fixation_pathways_in_prokaryotes
Citrate_cycle_(TCA_cycle)
Glutathione_metabolism
Peroxisome
NAD binding,
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,
magnesium ion binding,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
membrane coat,
COPI vesicle coat,
structural molecule activity,
| details | | CFinderM001688 | CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
CMGC_MAPK (from iTAK)
| details | | CFinderM001710 | membrane,
CBM22 Carbohydrate-Binding_Modules
GH10 Glycoside_Hydrolases
hydrolase activity, acting on glycosyl bonds,
hydrogen-translocating pyrophosphatase activity,
transporter activity,
inorganic diphosphatase activity,
proton transport,
transport,
isoprenoid biosynthetic process,
Terpenoid_backbone_biosynthesis
Oxidative_phosphorylation
| details | | CFinderM001762 | isocitrate metabolic process,
formaldehyde_catabolic_process
isocitrate dehydrogenase (NADP+) activity,
S-formylglutathione hydrolase activity,
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
carboxylesterase activity,
Carbon_fixation_pathways_in_prokaryotes
Peroxisome
Glutathione_metabolism
Citrate_cycle_(TCA_cycle)
NAD binding,
| details | | CFinderM001763 | protein phosphatase type 2A complex,
CMGC_MAPK (from iTAK)
mRNA_surveillance_pathway
| details | | CFinderM001792 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity,
isocitrate metabolic process,
PHD Transcription_Regulator(from iTAK)
isocitrate dehydrogenase (NADP+) activity,
Carbon_fixation_pathways_in_prokaryotes
Peroxisome
Glutathione_metabolism
Citrate_cycle_(TCA_cycle)
| details |
4.Expression profilings |
