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1.Module annotation (GSEA enrichment result) | Function Annotation | FDR | Gene Ontolog | | phosphopyruvate hydratase complex, | 0.005622275 | GO:0000015 | | TAZ Transcription_Regulator(from iTAK) | 0.008247292 | GFam | | L-malate dehydrogenase activity, | 0.020928346 | GO:0030060 | | transcription cofactor activity, | 0.020928346 | GO:0003712 | | malate dehydrogenase activity, | 0.020928346 | GO:0016615 | | phosphopyruvate hydratase activity, | 0.020928346 | GO:0004634 | | histone acetyltransferase activity, | 0.020928346 | GO:0004402 | | malate metabolic process, | 0.027527629 | GO:0006108 | | cellular carbohydrate metabolic process, | 0.027527629 | GO:0044262 | | MYB-related Transcription_Regulator(from iTAK) | 0.029033967 | GFam | | MYB_related Transcription_Regulator(from PlantTFDB) | 0.029033967 | GFam |
2.Module member annotation | Gene ID | Annotation | Arabidopsis ortholog (Blast e-value) | | PH01000145G0550 | histone acetyltransferase of the CBP family 12 | AT1G16710 (0.00E+00) | | PH01000305G1060 | Lactate/malate dehydrogenase family protein | AT5G43330 (9.00E-155) | | PH01000428G0040 | Duplicated homeodomain-like superfamily protein | AT3G52250 (1.00E-84) | | PH01001577G0380 | RNA polymerase II transcription mediators | AT4G00450 (2.30E-30) | | PH01002251G0250 | Enolase | AT2G36530 (0.00E+00) | | PH01002687G0240 | histone acetyltransferase of the CBP family 1 | AT1G79000 (3.00E-151) |
3.Direct connection functional modules | Module ID | Function Annotation | Overlap condition | | CFinderM000111 | protein insertion into membrane,
ATP citrate synthase activity,
succinate-CoA ligase (ADP-forming) activity,
regulation_of_anion_transport
voltage-gated anion channel activity,
anion transport,
| details | | CFinderM000117 | nuclear chromosome,
Glycolysis_/_Gluconeogenesis
Ino80_complex
ATP citrate synthase activity,
phosphoglycerate kinase activity,
succinate-CoA ligase (ADP-forming) activity,
| details | | CFinderM000496 | cullin-RING ubiquitin ligase complex,
ubiquitin protein ligase binding,
Pseudo ARR-B Transcription_Regulator(from iTAK)
ubiquitin-dependent protein catabolic process,
diphosphomevalonate decarboxylase activity,
L,L-diaminopimelate_aminotransferase_activity
Citrate_cycle_(TCA_cycle)
Pyruvate_metabolism
| details | | CFinderM000712 | anion transport,
regulation_of_anion_transport
protein insertion into membrane,
mitochondrial outer membrane,
phosphopyruvate hydratase complex,
voltage-gated anion channel activity,
phosphopyruvate hydratase activity,
| details | | CFinderM001030 | protein import into mitochondrial inner membrane,
RLK-Pelle_L-LEC (from iTAK)
protein methylation,
| details | | CFinderM001083 | MYB-related Transcription_Regulator(from iTAK)
MYB_related Transcription_Regulator(from PlantTFDB)
Pseudo ARR-B Transcription_Regulator(from iTAK)
protein import into mitochondrial inner membrane,
transcription, DNA-dependent,
nucleus,
IWS1 Transcription_Regulator(from iTAK)
GNAT Transcription_Regulator(from iTAK)
| details | | CFinderM001419 | nucleocytoplasmic transport,
GTP_catabolic_process
small GTPase mediated signal transduction,
protein transport,
signal transduction,
intracellular protein transport,
cellular carbohydrate metabolic process,
malate metabolic process,
GTPase activity,
GTP binding,
malate dehydrogenase activity,
L-malate dehydrogenase activity,
intracellular,
Pyruvate_metabolism
Carbon_fixation_in_photosynthetic_organisms
Glyoxylate_and_dicarboxylate_metabolism
Citrate_cycle_(TCA_cycle)
membrane,
| details | | CFinderM001535 | TAZ Transcription_Regulator(from iTAK)
transcription cofactor activity,
histone acetyltransferase activity,
Oxidative_phosphorylation
peptidyl-prolyl cis-trans isomerase activity,
| details | | CFinderM001569 | Alanine,_aspartate_and_glutamate_metabolism
TAZ Transcription_Regulator(from iTAK)
Group-Pl-3 (from iTAK)
CMGC_CLK (from iTAK)
NF-YC Transcription_Regulator(from PlantTFDB)
HB-other Transcription_Regulator(from PlantTFDB)
arginine biosynthetic process,
'de novo' IMP biosynthetic process,
eukaryotic translation elongation factor 1 complex,
argininosuccinate synthase activity,
phosphoribosylformylglycinamidine cyclo-ligase activity,
| details | | CFinderM001749 | phosphoribosylformylglycinamidine cyclo-ligase activity,
autophagy,
'de novo' IMP biosynthetic process,
cellular protein metabolic process,
| details | | CFinderM001835 | MYB_related Transcription_Regulator(from PlantTFDB)
MYB-related Transcription_Regulator(from iTAK)
nuclear chromosome,
chromatin binding,
| details |
4.Expression profilings |
