CFinderM001868's details annotation
1.Tissue preferential analysis
root  culm  leaf  shoot  sheath  rhizome  bud  panicle  
     
2.Stress differential analysis
     
     
Protein:Yellow color--query protein     Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein     Blue--proteins own interaction and negative co-expression relationship with target protein     Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

1.Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
Rab GTPase activator activity,0.000101274GO:0005097
mitochondrial respiratory chain complex IV,0.001125158GO:0005751
cytochrome-c oxidase activity,0.004638739GO:0004129
mitochondrial inner membrane,0.005617883GO:0005743
Oxidative_phosphorylation0.035928121KEGG
RNA_degradation0.035928121KEGG

2.Module member annotation

Gene IDAnnotationArabidopsis ortholog (Blast e-value)
PH01000287G0840-AT5G47570 (3.60E-46)
PH01000322G0410-AT5G58510 (6.00E-150)
PH01000438G0100F-box family proteinAT1G76920 (3.00E-91)
PH01000465G0590-AT5G58510 (2.00E-114)
PH01000589G0240cytochrome c oxidase-relatedAT4G37830 (1.10E-27)
PH01001155G0410transcription regulatorsAT1G02080 (0.00E+00)

3.Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderM000540condensin_complex
CK1_CK1 (from iTAK)
mitotic_chromosome_condensation
details
CFinderM000624proton-transporting two-sector ATPase complex, proton-transporting domain,
proton-transporting V-type ATPase, V0 domain,
ATP hydrolysis coupled proton transport,
hydrogen ion transmembrane transporter activity,
HB-other Transcription_Regulator(from PlantTFDB)
details
CFinderM001155UDP-glucose:glycoprotein_glucosyltransferase_activity
nuclear pore,
binding,
protein transporter activity,
Proteasome
protein glycosylation,
details
CFinderM001662myosin complex,
motor activity,
Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis
Arp2/3_protein_complex
cytoskeleton,
Arp2/3_complex-mediated_actin_nucleation
regulation of actin filament polymerization,
ATP binding,
ubiquitin thiolesterase activity,
details
CFinderM001691Spliceosome
Rab GTPase activator activity,
details
CFinderM001694TKL_CTR1-DRK-2 (from iTAK)
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
Steroid_hormone_biosynthesis
Fatty_acid_elongation
Biosynthesis_of_unsaturated_fatty_acids
cytochrome-c oxidase activity,
histone acetyltransferase activity,
transcription cofactor activity,
details
CFinderM001813GT48 GlycosylTransferases
mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
1,3-beta-D-glucan synthase complex,
S-adenosylmethionine-dependent methyltransferase activity,
cytochrome-c oxidase activity,
steroid biosynthetic process,
(1->3)-beta-D-glucan biosynthetic process,
metabolic process,
RNA_degradation
Oxidative_phosphorylation
cellular metabolic process,
details
CFinderM001865mitochondrial respiratory chain complex IV,
mitochondrial inner membrane,
cytochrome-c oxidase activity,
Oxidative_phosphorylation
details

4.Expression profilings