CFinderADM000354's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| RNA polymerase II regulatory region sequence-specific DNA binding | 0.000148898 | GO:0000977 |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 0.000148898 | GO:0001228 |
| RNA polymerase II transcription factor binding | 0.000148898 | GO:0001085 |
| transcription factor complex | 0.000156765 | GO:0005667 |
| cell differentiation | 0.000218907 | GO:0030154 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.000235023 | cazy family |
| Transcription_related, Transcription factor: C2C2-GATA | 0.000235023 | TF family |
| zinc ion binding | 0.00025232 | GO:0008270 |
| Transcription_related, Transcription regulator: PHD | 0.000299314 | TF family |
| chromatin binding | 0.000477075 | GO:0003682 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.003195818 | GO:0004553 |
| carbohydrate metabolic process | 0.013743717 | GO:0005975 |
| Ubiquitin_Proteasome_system, E3: RING | 0.014166142 | ubs family |
| regulation of transcription, DNA-templated | 0.0344748 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007672 | AT4G09560 (3.00E-19) | Protease-associated (PA) RING/U-box zinc finger family protein |
| CRO_T025864 | - | - |
| CRO_T026146 | AT1G13130 (4.00E-144) | Cellulase (glycosyl hydrolase family 5) protein |
| CRO_T026274 | - | - |
| CRO_T033021 | AT4G14920 (2.00E-14) | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000490 | Protein_kinases_phosphatases, PPC:2.2.1: Unknown Function Kinase organelle organization Autophagy - animal Insulin signaling pathway response to starvation autophagy exocyst exocytosis single-organism cellular process cytoplasmic part protein phosphorylation protein kinase activity | details |
| CFinderADM000542 | binding | details |
| CFinderADM001533 | nucleus Toll and Imd signaling pathway postreplication repair isoleucyl-tRNA aminoacylation phenylpropanoid metabolic process protein K63-linked ubiquitination NADPH-hemoprotein reductase activity isoleucine-tRNA ligase activity regulation of translational fidelity RNA polymerase II transcription factor binding aminoacyl-tRNA editing activity cell differentiation Transcription_related, Transcription factor: C2C2-GATA transcription factor complex transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding RNA polymerase II regulatory region sequence-specific DNA binding cytosol Ubiquitin_Proteasome_system, E2: UBC ribosome biogenesis FMN binding ubiquitin protein ligase binding chromatin binding Aminoacyl-tRNA biosynthesis Ribosome biogenesis in eukaryotes response to abscisic acid ubiquitin protein ligase activity ligase activity endoplasmic reticulum membrane regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |