CFinderADM000490's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:2.2.1: Unknown Function Kinase | 1.41E-06 | kinase family |
| organelle organization | 6.14E-05 | GO:0006996 |
| Autophagy - animal | 8.26E-05 | KEGG pathway |
| Insulin signaling pathway | 8.26E-05 | KEGG pathway |
| response to starvation | 0.000132374 | GO:0042594 |
| autophagy | 0.000132374 | GO:0006914 |
| exocyst | 0.00034537 | GO:0000145 |
| exocytosis | 0.000567343 | GO:0006887 |
| single-organism cellular process | 0.000655545 | GO:0044763 |
| cytoplasmic part | 0.001803244 | GO:0044444 |
| protein phosphorylation | 0.031279426 | GO:0006468 |
| protein kinase activity | 0.031916793 | GO:0004672 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007672 | AT4G09560 (3.00E-19) | Protease-associated (PA) RING/U-box zinc finger family protein |
| CRO_T010807 | AT4G28260 (3.00E-135) | unknown protein |
| CRO_T013524 | AT5G17290 (7.00E-99) | APG5|AUTOPHAGY 5 |
| CRO_T021894 | AT4G32250 (0) | Protein kinase superfamily protein |
| CRO_T033546 | AT5G03540 (0) | ATEXO70A1|exocyst subunit exo70 family protein A1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000236 | Mitophagy - animal MAPK signaling pathway - fly transcription factor TFIID complex cytosol THO complex part of transcription export complex GMP synthase activity GMP synthase (glutamine-hydrolyzing) activity Ubiquitin_Proteasome_system, E3 adaptor: DWD cell plate production of ta-siRNAs involved in RNA interference regulation of ethylene-activated signaling pathway GMP biosynthetic process cytokinin-activated signaling pathway mRNA export from nucleus L-tryptophan biosynthesis sphingolipid biosynthesis (plants) regulation of vesicle fusion activation of GTPase activity cytokinesis by cell plate formation DNA-templated transcription, initiation Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family nuclear envelope Insulin signaling pathway protein import into nucleus Rab GTPase binding exocyst jasmonic acid mediated signaling pathway Ran GTPase binding Basal transcription factors GTPase activator activity exocytosis translational initiation endomembrane system protein transporter activity small GTPase mediated signal transduction protein heterodimerization activity Endocytosis signal transduction translation initiation factor activity transferase activity, transferring glycosyl groups endosome intracellular protein transport Spliceosome | details |
| CFinderADM000354 | RNA polymerase II regulatory region sequence-specific DNA binding transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding RNA polymerase II transcription factor binding transcription factor complex cell differentiation hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: C2C2-GATA zinc ion binding Transcription_related, Transcription regulator: PHD chromatin binding hydrolase activity, hydrolyzing O-glycosyl compounds carbohydrate metabolic process Ubiquitin_Proteasome_system, E3: RING regulation of transcription, DNA-templated | details |
| CFinderADM000542 | binding | details |
| CFinderADM001429 | protein kinase CK2 complex transcription factor TFIID complex peroxisomal membrane regulation of ethylene-activated signaling pathway peroxisome organization organelle organization protein kinase regulator activity cytokinin-activated signaling pathway regulation of protein kinase activity response to starvation DNA-templated transcription, initiation autophagy Ubiquitin_Proteasome_system, E2: UBC jasmonic acid mediated signaling pathway Autophagy - animal Basal transcription factors Peroxisome SNARE interactions in vesicular transport single-organism cellular process translational initiation Ribosome biogenesis in eukaryotes protein heterodimerization activity translation initiation factor activity cytoplasmic part kinase activity phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |