CFinderADM000398's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein processing in endoplasmic reticulum | 1.18E-18 | KEGG pathway |
| unfolded protein binding | 8.79E-18 | GO:0051082 |
| endoplasmic reticulum lumen | 2.11E-16 | GO:0005788 |
| protein folding | 3.71E-15 | GO:0006457 |
| dolichyl-phosphate-mannose-protein mannosyltransferase complex | 4.65E-06 | GO:0031502 |
| endoplasmic reticulum | 5.44E-06 | GO:0005783 |
| chain elongation of O-linked mannose residue | 6.17E-06 | GO:0044845 |
| positive regulation by host of viral process | 6.17E-06 | GO:0044794 |
| pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 6.17E-06 | GO:0052033 |
| cell wall mannoprotein biosynthetic process | 6.17E-06 | GO:0000032 |
| regulation of endoplasmic reticulum unfolded protein response | 6.17E-06 | GO:1900101 |
| calcium ion binding | 7.34E-06 | GO:0005509 |
| dolichyl-phosphate-mannose-protein mannosyltransferase activity | 1.48E-05 | GO:0004169 |
| protein O-linked mannosylation | 1.80E-05 | GO:0035269 |
| defense response to fungus | 0.000477422 | GO:0050832 |
| Protein export | 0.000513365 | KEGG pathway |
| defense response to bacterium | 0.001540249 | GO:0042742 |
| response to stress | 0.001957617 | GO:0006950 |
| multicellular organism development | 0.001957617 | GO:0007275 |
| 2-alkenal reductase [NAD(P)] activity | 0.00314219 | GO:0032440 |
| carbohydrate binding | 0.00317092 | GO:0030246 |
| ATP binding | 0.009865403 | GO:0005524 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T016124 | AT1G56340 (1.00E-165) | CRT1|calreticulin 1; CRT1a|calreticulin 1a |
| CRO_T022145 | AT1G10350 (4.00E-37) | DNAJ heat shock family protein |
| CRO_T022566 | AT5G52640 (2.00E-70) | AtHsp90-1|HEAT SHOCK PROTEIN 90-1; ATHSP90.1|heat shock protein 90.1; HSP81-1|HEAT SHOCK PROTEIN 81-1; HSP83|HEAT SHOCK PROTEIN 83 |
| CRO_T023382 | AT4G28480 (2.00E-16) | DNAJ heat shock family protein |
| CRO_T023405 | AT2G25110 (8.00E-04) | AtSDF2|STROMAL CELL-DERIVED FACTOR 2-like protein precursor; ATSDL|ATSDF2-LIKE |
| CRO_T029688 | AT5G61790 (3.00E-174) | CNX1|calnexin 1 |
| CRO_T030131 | AT1G09080 (0) | BIP3|binding protein 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000399 | endoplasmic reticulum calcium ion binding Protein processing in endoplasmic reticulum unfolded protein binding protein folding ESCRT I complex hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc protein complex binding mannosyl-oligosaccharide 1,2-alpha-mannosidase activity endoplasmic reticulum lumen endoplasmic reticulum unfolded protein response protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway glycoprotein ERAD pathway N-glycan processing ER-associated ubiquitin-dependent protein catabolic process Protein export Endocytosis 2-alkenal reductase [NAD(P)] activity carbohydrate binding | details |
| CFinderADM000727 | uracil degradation I (reductive) formation of glycosidic bonds, GlycosylTransferases: GTnc euchromatin post-translational protein modification double-strand break repair negative regulation of protein kinase activity uracil catabolic process meiotic cell cycle Mre11 complex protein kinase inhibitor activity dihydropyrimidinase activity signal recognition particle, endoplasmic reticulum targeting synaptonemal complex COPI vesicle coat oligosaccharyltransferase complex endoplasmic reticulum lumen dolichyl-diphosphooligosaccharide-protein glycotransferase activity double-stranded RNA binding protein N-linked glycosylation via asparagine SRP-dependent cotranslational protein targeting to membrane 7S RNA binding fatty-acyl-CoA binding protein kinase binding intra-Golgi vesicle-mediated transport retrograde vesicle-mediated transport, Golgi to ER structural molecule activity 3'-5' exonuclease activity endonuclease activity manganese ion binding ER to Golgi vesicle-mediated transport N-Glycan biosynthesis Protein export Pyrimidine metabolism response to stress Homologous recombination unfolded protein binding nucleic acid phosphodiester bond hydrolysis nucleolus protein folding intracellular protein transport GTPase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD Golgi apparatus endoplasmic reticulum GTP binding | details |
Expression profiles
 Show details about module gene expression profiling |