CFinderADM000400's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Carbon metabolism | 2.55E-06 | KEGG pathway |
| Cytochrome_P450, Cytochrome P450: CYP76C | 4.95E-06 | CYP450 family |
| aconitate hydratase activity | 2.55E-05 | GO:0003994 |
| L-aspartate biosynthesis | 3.56E-05 | plantCyc |
| L-aspartate degradation I | 3.56E-05 | plantCyc |
| magnoflorine biosynthesis | 3.56E-05 | plantCyc |
| superpathway of L-isoleucine biosynthesis I | 3.56E-05 | plantCyc |
| superpathway of L-threonine biosynthesis | 3.56E-05 | plantCyc |
| protein metabolic process | 0.000103467 | GO:0019538 |
| glyoxylate cycle | 0.000120472 | plantCyc |
| superpathway of aspartate and asparagine biosynthesis | 0.000120472 | plantCyc |
| L-phenylalanine:2-oxoglutarate aminotransferase activity | 0.000128721 | GO:0080130 |
| L-aspartate:2-oxoglutarate aminotransferase activity | 0.000128721 | GO:0004069 |
| L-glutamine biosynthesis III | 0.000142333 | plantCyc |
| TCA cycle II (plants and fungi) | 0.000164232 | plantCyc |
| cellular amino acid metabolic process | 0.000218085 | GO:0006520 |
| single-organism metabolic process | 0.000757173 | GO:0044710 |
| biosynthetic process | 0.000757173 | GO:0009058 |
| 4 iron, 4 sulfur cluster binding | 0.001045158 | GO:0051539 |
| peptidase activity | 0.00175118 | GO:0008233 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 0.00238076 | GO:0016709 |
| pyridoxal phosphate binding | 0.003304664 | GO:0030170 |
| metabolic process | 0.013348219 | GO:0008152 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004421 | AT5G11520 (0) | ASP3|aspartate aminotransferase 3; YLS4|YELLOW-LEAF-SPECIFIC GENE 4 |
| CRO_T006608 | AT2G05710 (0) | ACO3|aconitase 3 |
| CRO_T011432 | - | - |
| CRO_T012974 | AT2G45550 (1.00E-90) | CYP76C4|cytochrome P450, family 76, subfamily C, polypeptide 4 |
| CRO_T027223 | AT1G03220 (1.00E-88) | Eukaryotic aspartyl protease family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000005 | mannan endo-1,4-beta-mannosidase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Fructose and mannose metabolism monolayer-surrounded lipid storage body hydrolase activity, acting on ester bonds Phenylpropanoid biosynthesis proteolysis involved in cellular protein catabolic process lipid storage S-methyltransferase activity Transcription_related, Transcription factor: AP2 tricarboxylic acid cycle mannan catabolic process seed oilbody biogenesis glyoxysome response to freezing glyoxylate cycle peroxidase activity magnoflorine biosynthesis 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene 9,9'-dicis-carotene:quinone oxidoreductase activity 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity catechol O-methyltransferase activity extracellular space Lysosome Transcription_related, Transcription factor: zf-HD metabolic process carbohydrate metabolic process cysteine-type endopeptidase activity membrane extracellular region serine-type carboxypeptidase activity triacylglycerol degradation response to stimulus oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Starch and sucrose metabolism Fatty acid elongation lipase activity binding aleurone grain monooxygenase activity cellular oxidant detoxification single-organism metabolic process pectin catabolic process hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 | details |
| CFinderADM000122 | flavonoid metabolic process UDP-glucosyltransferase activity secondary metabolite biosynthetic process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen formate-tetrahydrofolate ligase activity Cytochrome_P450, Cytochrome P450: CYP81K folic acid-containing compound biosynthetic process nitrate transport response to nitrate formation of glycosidic bonds, GlycosylTransferases: GTnc indole glucosinolate metabolic process defense response to other organism folate polyglutamylation iron ion binding heme binding folate transformations II tetrahydrofolate biosynthesis II sesamin biosynthesis dioxygenase activity | details |
Expression profiles
 Show details about module gene expression profiling |