CFinderADM000652's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.15E-10 | GO:0016705 |
| monooxygenase activity | 2.15E-10 | GO:0004497 |
| Cytochrome_P450, Cytochrome P450: CYP71B | 3.39E-09 | CYP450 family |
| iron ion binding | 1.00E-08 | GO:0005506 |
| heme binding | 1.24E-08 | GO:0020037 |
| vindoline and vinblastine biosynthesis | 4.09E-08 | plantCyc |
| polygalacturonate 4-alpha-galacturonosyltransferase activity | 8.35E-05 | GO:0047262 |
| homogalacturonan biosynthesis | 0.000124246 | plantCyc |
| oxidation-reduction process | 0.000184772 | GO:0055114 |
| pectin biosynthetic process | 0.000211174 | GO:0045489 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000514308 | cazy family |
| Transcription_related, Transcription factor: WRKY | 0.000707314 | TF family |
| Amino sugar and nucleotide sugar metabolism | 0.001553548 | KEGG pathway |
| protein transport | 0.001955328 | GO:0015031 |
| Golgi membrane | 0.004786961 | GO:0000139 |
| membrane | 0.005533751 | GO:0016020 |
| cell wall organization | 0.007946794 | GO:0071555 |
| transport | 0.011895758 | GO:0006810 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012059 | AT1G11180 (2.00E-88) | SCAMP2|Secretory carrier membrane protein 2 |
| CRO_T014272 | AT1G13110 (1.00E-95) | CYP71B7|cytochrome P450, family 71 subfamily B, polypeptide 7 |
| CRO_T017449 | AT3G26230 (2.00E-42) | CYP71B24|cytochrome P450, family 71, subfamily B, polypeptide 24 |
| CRO_T018523 | AT4G23550 (1.00E-23) | ATWRKY29; WRKY29|WRKY family transcription factor |
| CRO_T022496 | AT1G13110 (8.00E-101) | CYP71B7|cytochrome P450, family 71 subfamily B, polypeptide 7 |
| CRO_T031265 | AT5G48410 (4.00E-109) | ATGLR1.3|GLUTAMATE RECEPTOR 1.3 |
| CRO_T033227 | AT5G47780 (0) | GAUT4|galacturonosyltransferase 4 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000104 | kaempferol gentiobioside biosynthesis (-)-secologanin biosynthetic process quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: WRKY Transcription_related, Transcription factor: C2H2 flavonoid glucuronidation flavonoid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc heme binding iron ion binding | details |
| CFinderADM000638 | pyruvate fermentation to lactate 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity L-lactate dehydrogenase activity ATPase activator activity regulation of pentose-phosphate shunt positive regulation of ATPase activity cation-transporting ATPase activity carboxylic acid metabolic process cellular component organization gluconeogenesis cellular protein modification process cation transmembrane transport chaperone binding glycolysis I (from glucose 6-phosphate) glycolytic process Glycolysis / Gluconeogenesis Transcription_related, Transcription regulator: PHD Protein export protein transport ligase activity | details |
| CFinderADM001052 | translation preinitiation complex Protein_kinases_phosphatases, PPC:4.1.7: APG1 Like Kinase recognition of pollen eukaryotic translation initiation factor 3 complex Transcription_related, Transcription factor: WRKY translational initiation membrane RNA transport translation initiation factor activity transport adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Ubiquitin_Proteasome_system, E3: RING protein phosphorylation | details |
| CFinderADM001386 | Cytochrome_P450, Cytochrome P450: CYP97B Selenocompound metabolism lutein biosynthesis positive regulation of ATPase activity ATPase activator activity thioredoxin-disulfide reductase activity thioredoxin pathway removal of superoxide radicals chaperone binding protein transport oxidation-reduction process oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity iron ion binding heme binding | details |
Expression profiles
 Show details about module gene expression profiling |