CFinderADM001052's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| translation preinitiation complex | 6.91E-06 | GO:0070993 |
| Protein_kinases_phosphatases, PPC:4.1.7: APG1 Like Kinase | 1.03E-05 | kinase family |
| recognition of pollen | 0.000323786 | GO:0048544 |
| eukaryotic translation initiation factor 3 complex | 0.000465353 | GO:0005852 |
| Transcription_related, Transcription factor: WRKY | 0.00103886 | TF family |
| translational initiation | 0.001124158 | GO:0006413 |
| membrane | 0.001706074 | GO:0016020 |
| RNA transport | 0.002712166 | KEGG pathway |
| translation initiation factor activity | 0.007007368 | GO:0003743 |
| transport | 0.010346603 | GO:0006810 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.01329523 | cazy family |
| Ubiquitin_Proteasome_system, E3: RING | 0.016999371 | ubs family |
| protein phosphorylation | 0.033482996 | GO:0006468 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013600 | AT5G59000 (9.00E-22) | RING/FYVE/PHD zinc finger superfamily protein |
| CRO_T014305 | AT1G49015 (2.00E-40) | DPP6 N-terminal domain-like protein |
| CRO_T017726 | AT3G53930 (4.00E-13) | Protein kinase superfamily protein |
| CRO_T018523 | AT4G23550 (1.00E-23) | ATWRKY29; WRKY29|WRKY family transcription factor |
| CRO_T031265 | AT5G48410 (4.00E-109) | ATGLR1.3|GLUTAMATE RECEPTOR 1.3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000104 | kaempferol gentiobioside biosynthesis (-)-secologanin biosynthetic process quercetin glucoside biosynthesis (Allium) quercetin gentiotetraside biosynthesis Cytochrome_P450, Cytochrome P450: CYP71B Transcription_related, Transcription factor: WRKY Transcription_related, Transcription factor: C2H2 flavonoid glucuronidation flavonoid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity intracellular membrane-bounded organelle formation of glycosidic bonds, GlycosylTransferases: GTnc heme binding iron ion binding | details |
| CFinderADM000652 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen monooxygenase activity Cytochrome_P450, Cytochrome P450: CYP71B iron ion binding heme binding vindoline and vinblastine biosynthesis polygalacturonate 4-alpha-galacturonosyltransferase activity homogalacturonan biosynthesis oxidation-reduction process pectin biosynthetic process formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY Amino sugar and nucleotide sugar metabolism protein transport Golgi membrane membrane cell wall organization transport | details |
Expression profiles
 Show details about module gene expression profiling |