CFinderADM000661's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription regulator: Pseudo ARR-B | 1.73E-05 | TF family |
| polar nucleus | 2.30E-05 | GO:0043078 |
| Circadian rhythm - plant | 6.49E-05 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase | 7.84E-05 | kinase family |
| RNA polymerase II transcription cofactor activity | 0.000156765 | GO:0001104 |
| regulation of gene expression | 0.000255419 | GO:0010468 |
| defense response to fungus | 0.000255419 | GO:0050832 |
| phosphorelay signal transduction system | 0.000377306 | GO:0000160 |
| mediator complex | 0.000465353 | GO:0016592 |
| regulation of transcription from RNA polymerase II promoter | 0.000498731 | GO:0006357 |
| plastid | 0.003447806 | GO:0009536 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.007190955 | cazy family |
| intracellular | 0.011104173 | GO:0005622 |
| protein kinase activity | 0.011575709 | GO:0004672 |
| nucleotide binding | 0.021753295 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000926 | AT4G23910 (1.00E-24) | unknown protein |
| CRO_T001229 | AT3G24550 (1.00E-119) | ATPERK1|proline-rich extensin-like receptor kinase 1 |
| CRO_T003919 | AT1G47720 (4.00E-37) | OSB1|Organellar Single-stranded |
| CRO_T009367 | AT4G04780 (2.00E-44) | MED21|mediator 21 |
| CRO_T026788 | AT3G16857 (7.00E-19) | ARR1|response regulator 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000548 | Pyruvate metabolism Protein export proteolysis involved in cellular protein catabolic process serine-type carboxypeptidase activity helicase activity microtubule vacuole formation of glycosidic bonds, GlycosylTransferases: GTnc sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding | details |
| CFinderADM000657 | Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase mRNA surveillance pathway cellular process microtubule intracellular part plastid adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | details |
| CFinderADM000663 | Transcription_related, Transcription regulator: Pseudo ARR-B regulation of gene expression Circadian rhythm - plant phosphorelay signal transduction system Spliceosome intracellular binding | details |
| CFinderADM001148 | Transcription_related, Transcription regulator: Pseudo ARR-B Ferroptosis integral component of membrane ferroxidase activity L-serine transmembrane transporter activity ferric iron binding iron ion transport L-serine transport cellular iron ion homeostasis protein-cysteine S-palmitoyltransferase activity Circadian rhythm - plant regulation of gene expression phosphorelay signal transduction system oxidation-reduction process vacuolar membrane intracellular oxidoreductase activity | details |
Expression profiles
 Show details about module gene expression profiling |