CFinderADM000698's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| zinc ion binding | 0.04569351 | GO:0008270 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004500 | AT1G04830 (8.00E-148) | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| CRO_T008251 | AT1G71850 (6.00E-127) | Ubiquitin carboxyl-terminal hydrolase family protein |
| CRO_T013323 | AT2G20010 (0) | Protein of unknown function (DUF810) |
| CRO_T022610 | - | - |
| CRO_T029118 | AT3G08880 (4.00E-06) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000547 | fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent) lipid homeostasis fatty acid beta-oxidation using acyl-CoA dehydrogenase oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor acyl-CoA oxidase activity acyl-CoA dehydrogenase activity fatty-acyl-CoA binding Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) Transcription_related, Transcription regulator: mTERF Apelin signaling pathway Cell cycle Fatty acid metabolism intracellular signal transduction Peroxisome flavin adenine dinucleotide binding electron carrier activity protein phosphorylation | details |
| CFinderADM001880 | ribosome biogenesis cell division embryo development ending in seed dormancy microtubule protein ubiquitination Ubiquitin_Proteasome_system, E3 adaptor: F-box ubiquitin-protein transferase activity GTPase activity GTP binding | details |
| CFinderADM002028 | Protein_kinases_phosphatases, PPC:4.1.3: MAP2K MAP kinase kinase activity receptor signaling protein serine/threonine kinase activity cell division MAPK cascade microtubule MAPK signaling pathway - plant embryo development ending in seed dormancy protein binding methyltransferase activity ubiquitin-protein transferase activity protein ubiquitination methylation | details |
| CFinderADM002068 | regulation of epidermal cell differentiation inductive cell-cell signaling regulation of trichome morphogenesis regulation of epidermal cell division floral organ morphogenesis monopolar cell growth fruit morphogenesis signal recognition particle negative regulation of nucleic acid-templated transcription glycerate dehydrogenase activity trichome branching transcription corepressor activity photorespiration SRP-dependent cotranslational protein targeting to membrane 7S RNA binding microtubule cytoskeleton organization leaf morphogenesis regulation of cell shape Cell cycle Protein export protein homodimerization activity NAD binding GTPase activity trans-Golgi network Ubiquitin_Proteasome_system, E3 adaptor: F-box GTP binding | details |
| CFinderADM002280 | mevalonate pathway I coenzyme A metabolic process hydroxymethylglutaryl-CoA reductase (NADPH) activity Protein_kinases_phosphatases, PPC:4.2.1: Calcium Dependent Protein Kinase isoprenoid biosynthetic process calcium-dependent protein serine/threonine kinase activity calmodulin-dependent protein kinase activity Terpenoid backbone biosynthesis Plant-pathogen interaction exocyst abscisic acid-activated signaling pathway protein autophosphorylation peptidyl-serine phosphorylation exocytosis NADP binding calmodulin binding intracellular signal transduction protein ubiquitination ubiquitin-protein transferase activity calcium ion binding endoplasmic reticulum membrane | details |
Expression profiles
 Show details about module gene expression profiling |