CFinderADM000820's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of organ formation | 6.91E-06 | GO:0003156 |
| iron ion homeostasis | 1.15E-05 | GO:0055072 |
| Golgi transport complex | 0.000179076 | GO:0017119 |
| Transcription_related, Transcription factor: WRKY | 0.000286676 | TF family |
| signal transducer activity | 0.00034537 | GO:0004871 |
| drug transmembrane transporter activity | 0.000817828 | GO:0015238 |
| antiporter activity | 0.000817828 | GO:0015297 |
| drug transmembrane transport | 0.001442728 | GO:0006855 |
| signal transduction | 0.001442728 | GO:0007165 |
| defense response | 0.001442728 | GO:0006952 |
| anchored component of plasma membrane | 0.002667189 | GO:0046658 |
| plasmodesma | 0.011237444 | GO:0009506 |
| integral component of membrane | 0.026100395 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009798 | - | - |
| CRO_T014083 | AT1G58340 (5.00E-170) | BCD1|BUSH-AND-CHLOROTIC-DWARF 1; ZRZ|ZRIZI |
| CRO_T014711 | AT2G35980 (1.00E-16) | ATNHL10|ARABIDOPSIS NDR1/HIN1-LIKE 10; NHL10|NDR1/HIN1-LIKE; YLS9|YELLOW-LEAF-SPECIFIC GENE 9 |
| CRO_T027357 | AT2G44745 (2.00E-14) | WRKY12|WRKY DNA-binding protein 12 |
| CRO_T028992 | AT3G44716 (3.00E-04) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000821 | regulation of organ formation nitrate import peptide hormone binding iron ion homeostasis xylem and phloem pattern formation NAD+ ADP-ribosyltransferase activity Golgi transport complex integral component of membrane activation of MAPKK activity recognition of pollen MAP kinase kinase kinase activity signal transducer activity MAPK cascade Transcription_related, Transcription factor: C2C2-Dof Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) drug transmembrane transport signal transduction defense response drug transmembrane transporter activity Transcription_related, Transcription factor: bHLH Transcription_related, Transcription factor: C2H2 antiporter activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII 2-alkenal reductase [NAD(P)] activity carbohydrate binding anchored component of plasma membrane transporter activity | details |
| CFinderADM001745 | Spliceosome L-alanine biosynthesis II L-alanine degradation III L-alanine degradation II (to D-lactate) regulation of membrane potential Transcription_related, Transcription factor: WRKY transaminase activity voltage-gated potassium channel activity potassium ion transmembrane transport biosynthetic process unfolded protein binding helicase activity 2-alkenal reductase [NAD(P)] activity integral component of plasma membrane protein folding pyridoxal phosphate binding ATP binding Carbon metabolism nucleic acid binding | details |
| CFinderADM002123 | regulation of membrane potential voltage-gated potassium channel activity potassium ion transmembrane transport Transcription_related, Transcription factor: WRKY Plant-pathogen interaction unfolded protein binding integral component of plasma membrane 2-alkenal reductase [NAD(P)] activity protein folding Spliceosome calcium ion binding Ubiquitin_Proteasome_system, E3: RING | details |
Expression profiles
 Show details about module gene expression profiling |