CFinderADM001745's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Spliceosome | 1.08E-06 | KEGG pathway |
| L-alanine biosynthesis II | 8.66E-06 | plantCyc |
| L-alanine degradation III | 8.66E-06 | plantCyc |
| L-alanine degradation II (to D-lactate) | 1.73E-05 | plantCyc |
| regulation of membrane potential | 0.000241232 | GO:0042391 |
| Transcription_related, Transcription factor: WRKY | 0.000286676 | TF family |
| transaminase activity | 0.000402756 | GO:0008483 |
| voltage-gated potassium channel activity | 0.000402756 | GO:0005249 |
| potassium ion transmembrane transport | 0.000568241 | GO:0071805 |
| biosynthetic process | 0.000788754 | GO:0009058 |
| unfolded protein binding | 0.001622985 | GO:0051082 |
| helicase activity | 0.001622985 | GO:0004386 |
| 2-alkenal reductase [NAD(P)] activity | 0.002458783 | GO:0032440 |
| integral component of plasma membrane | 0.002642783 | GO:0005887 |
| protein folding | 0.003330959 | GO:0006457 |
| pyridoxal phosphate binding | 0.004406218 | GO:0030170 |
| ATP binding | 0.004437692 | GO:0005524 |
| Carbon metabolism | 0.007711459 | KEGG pathway |
| nucleic acid binding | 0.023230125 | GO:0003676 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007297 | AT1G01340 (2.00E-10) | ATCNGC10|cyclic nucleotide gated channel 10 |
| CRO_T014528 | AT1G55150 (0) | RH20|RNA helicase 20 |
| CRO_T021368 | AT4G26200 (3.00E-16) | ACCS7|1-amino-cyclopropane-1-carboxylate synthase 7 |
| CRO_T027357 | AT2G44745 (2.00E-14) | WRKY12|WRKY DNA-binding protein 12 |
| CRO_T031942 | AT5G28540 (3.00E-149) | BIP1|heat shock protein 70 (Hsp 70) family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000763 | plant sterol biosynthesis regulation of membrane potential Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) potassium ion transmembrane transport protein phosphorylation voltage-gated potassium channel activity oxidoreductase activity protein serine/threonine kinase activity Transcription_related, Transcription factor: G2-like helicase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Transcription_related, Transcription factor: ERF Spliceosome kinase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 ATP binding | details |
| CFinderADM000820 | regulation of organ formation iron ion homeostasis Golgi transport complex Transcription_related, Transcription factor: WRKY signal transducer activity drug transmembrane transporter activity antiporter activity drug transmembrane transport signal transduction defense response anchored component of plasma membrane plasmodesma integral component of membrane | details |
| CFinderADM000956 | Protein_kinases_phosphatases, PPC:1.7.1: S Domain Kinase (Type 1) adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.8.1: Leucine Rich Repeat Kinase I protein serine/threonine kinase activity voltage-gated potassium channel activity regulation of membrane potential plasma membrane potassium ion transmembrane transport integral component of plasma membrane oxidoreductase activity protein phosphorylation | details |
| CFinderADM001191 | Spliceosome uracil degradation I (reductive) beta-ureidopropionase activity uracil catabolic process Pyrimidine metabolism ATP binding cellular transition metal ion homeostasis metal ion transport single-organism process Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII transition metal ion binding helicase activity unfolded protein binding 2-alkenal reductase [NAD(P)] activity Transcription_related, Transcription factor: MYB protein folding adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | details |
| CFinderADM002089 | unfolded protein binding protein folding clathrin adaptor complex Ubiquitin_Proteasome_system, DUB: JAMM Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family ATP binding cytosol Lysosome Aminoacyl-tRNA biosynthesis Homologous recombination 2-alkenal reductase [NAD(P)] activity vesicle-mediated transport intracellular protein transport Spliceosome | details |
| CFinderADM002123 | regulation of membrane potential voltage-gated potassium channel activity potassium ion transmembrane transport Transcription_related, Transcription factor: WRKY Plant-pathogen interaction unfolded protein binding integral component of plasma membrane 2-alkenal reductase [NAD(P)] activity protein folding Spliceosome calcium ion binding Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM002282 | Spliceosome Transcription_related, Transcription factor: MYB helicase activity unfolded protein binding 2-alkenal reductase [NAD(P)] activity protein folding ATP binding nucleic acid binding DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |