CFinderADM000875's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| enoyl-[acyl-carrier-protein] reductase (NADH) activity | 1.96E-06 | GO:0004318 |
| 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.96E-06 | GO:0003865 |
| Fatty acid metabolism | 0.000427517 | KEGG pathway |
| very long chain fatty acid biosynthesis I | 0.000716717 | plantCyc |
| very long chain fatty acid biosynthesis II | 0.000716717 | plantCyc |
| defense response | 0.001894521 | GO:0006952 |
| lipid metabolic process | 0.001894521 | GO:0006629 |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.005102114 | ubs family |
| cytoplasmic part | 0.009136075 | GO:0044444 |
| cell wall | 0.011588236 | GO:0005618 |
| intracellular membrane-bounded organelle | 0.011588236 | GO:0043231 |
| extracellular region | 0.011588236 | GO:0005576 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000172 | AT1G14380 (6.00E-08) | IQD28|IQ-domain 28 |
| CRO_T008381 | AT2G20800 (7.00E-31) | NDB4|NAD(P)H dehydrogenase B4 |
| CRO_T008382 | - | - |
| CRO_T012445 | AT4G05460 (3.00E-30) | RNI-like superfamily protein |
| CRO_T022113 | AT1G22690 (2.00E-19) | Gibberellin-regulated family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000188 | very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II enoyl-[acyl-carrier-protein] reductase (NADH) activity 3-oxo-5-alpha-steroid 4-dehydrogenase activity protein kinase binding Fatty acid elongation regulation of cyclin-dependent protein serine/threonine kinase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Fatty acid metabolism transferase activity, transferring acyl groups other than amino-acyl groups fatty acid biosynthetic process lipid metabolic process defense response kinase activity cytoplasmic part intracellular membrane-bounded organelle extracellular region cell wall phosphorylation | details |
| CFinderADM000505 | enoyl-[acyl-carrier-protein] reductase (NADH) activity 3-oxo-5-alpha-steroid 4-dehydrogenase activity spermine and spermidine degradation III N-acetyltransferase activity iron-sulfur cluster binding Arginine and proline metabolism Transcription_related, Transcription regulator: GNAT Fatty acid metabolism very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II Transcription_related, Transcription factor: C2H2 defense response lipid metabolic process Ubiquitin_Proteasome_system, E3 adaptor: F-box sequence-specific DNA binding | details |
| CFinderADM001749 | endoplasmic reticulum-Golgi intermediate compartment UDP-glucose transport purine nucleotide-sugar transmembrane transport enoyl-[acyl-carrier-protein] reductase (NADH) activity 3-oxo-5-alpha-steroid 4-dehydrogenase activity nucleotide-sugar transmembrane transporter activity nucleotide transmembrane transport Fatty acid metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II lipid metabolic process integral component of membrane | details |
| CFinderADM002251 | 3-oxo-5-alpha-steroid 4-dehydrogenase activity enoyl-[acyl-carrier-protein] reductase (NADH) activity transcription regulatory region sequence-specific DNA binding cellular response to gravity heterochromatin assembly mitochondrial respiratory chain complex IV assembly tubulin complex Phagosome chromatin silencing complex response to cadmium ion pectin biosynthetic process polygalacturonate 4-alpha-galacturonosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc chromatin silencing chromatin microtubule-based process structural constituent of cytoskeleton homogalacturonan biosynthesis very long chain fatty acid biosynthesis I chromatin binding very long chain fatty acid biosynthesis II Fatty acid metabolism Amino sugar and nucleotide sugar metabolism lipid metabolic process embryo development ending in seed dormancy GTPase activity copper ion binding microtubule Golgi membrane cell wall organization endosome apoplast trans-Golgi network GTP binding cell wall plasmodesma | details |
Expression profiles
 Show details about module gene expression profiling |