CFinderADM001018's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| pyridoxine biosynthetic process | 2.93E-06 | GO:0008615 |
| NADH metabolic process | 2.93E-06 | GO:0006734 |
| NADP metabolic process | 2.93E-06 | GO:0006739 |
| NADH repair | 3.93E-06 | plantCyc |
| NADPHX epimerase activity | 4.39E-06 | GO:0052857 |
| NADHX epimerase activity | 4.39E-06 | GO:0052856 |
| pyridoxamine-phosphate oxidase activity | 9.75E-06 | GO:0004733 |
| pyridoxal 5'-phosphate salvage I | 1.18E-05 | plantCyc |
| pyridoxal phosphate biosynthetic process | 1.54E-05 | GO:0042823 |
| Vitamin B6 metabolism | 3.60E-05 | KEGG pathway |
| aminopeptidase activity | 5.70E-05 | GO:0004177 |
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | 0.000106035 | KEGG pathway |
| manganese ion binding | 0.000220371 | GO:0030145 |
| FMN binding | 0.000256315 | GO:0010181 |
| proteolysis | 0.010592981 | GO:0006508 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002922 | AT4G29490 (5.00E-85) | Metallopeptidase M24 family protein |
| CRO_T008788 | AT5G49970 (4.00E-107) | ATPPOX|pyridoxin (pyrodoxamine) 5'-phosphate oxidase; PDX3|HOMOLOG OF YEAST PYRIDOXINE AUXOTROPHY 3 |
| CRO_T018489 | AT3G58130 (7.00E-85) | N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein |
| CRO_T023798 | AT2G33510 (2.00E-16) | unknown protein |
| CRO_T031717 | AT3G13780 (2.00E-33) | SMAD/FHA domain-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001764 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 aminopeptidase activity cellulase activity hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc manganese ion binding cellulose catabolic process transition metal ion binding actin binding cellular transition metal ion homeostasis metal ion transport proteolysis | details |
| CFinderADM001880 | ribosome biogenesis cell division embryo development ending in seed dormancy microtubule protein ubiquitination Ubiquitin_Proteasome_system, E3 adaptor: F-box ubiquitin-protein transferase activity GTPase activity GTP binding | details |
| CFinderADM002071 | lysyl-tRNA aminoacylation lysine-tRNA ligase activity ubiquitin-dependent protein catabolic process small GTPase mediated signal transduction Aminoacyl-tRNA biosynthesis Endocytosis protein ubiquitination GTP binding Ubiquitin_Proteasome_system, E3: RING nucleic acid binding hydrolase activity intracellular | details |
| CFinderADM002292 | lysyl-tRNA aminoacylation lysine-tRNA ligase activity protein domain specific binding MAPK signaling pathway - yeast small GTPase mediated signal transduction Aminoacyl-tRNA biosynthesis Endocytosis GTP binding intracellular nucleic acid binding hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |