CFinderADM001112's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| myo-inositol transport | 6.44E-05 | GO:0015798 |
| myo-inositol:proton symporter activity | 6.44E-05 | GO:0005366 |
| glucose transmembrane transporter activity | 0.00046905 | GO:0005355 |
| transmembrane transporter activity | 0.00046905 | GO:0022857 |
| sugar:proton symporter activity | 0.00046905 | GO:0005351 |
| glucose transmembrane transport | 0.000498514 | GO:1904659 |
| glucose import | 0.000536419 | GO:0046323 |
| proton transport | 0.00061776 | GO:0015992 |
| integral component of plasma membrane | 0.007341065 | GO:0005887 |
| transmembrane transport | 0.014545702 | GO:0055085 |
| zinc ion binding | 0.049568459 | GO:0008270 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007096 | AT2G31130 (4.00E-21) | unknown protein |
| CRO_T009213 | AT5G52910 (0) | ATIM|TIMELESS |
| CRO_T014592 | AT1G30220 (0) | ATINT2|INOSITOL TRANSPORTER 2 |
| CRO_T015598 | AT1G19100 (4.00E-12) | DMS11|DEFECTIVE IN MERISTEM SILENCING 11; MORC6|Microrchidia 6 |
| CRO_T031305 | AT5G40230 (5.00E-52) | UMAMIT37|Usually multiple acids move in and out Transporters 37 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000291 | oxidation-reduction process Glycerolipid metabolism sporopollenin precursors biosynthesis diacylglycerol and triacylglycerol biosynthesis acyl-CoA metabolic process neutral lipid biosynthetic process tetrahydrofolate metabolic process tyrosine biosynthetic process geranylgeranyl diphosphate biosynthetic process geranyl diphosphate biosynthetic process inositol trisphosphate metabolic process farnesyl diphosphate biosynthetic process prephenate dehydrogenase (NADP+) activity sarcosine oxidase activity dioxygenase activity phospholipid:diacylglycerol acyltransferase activity acyl-CoA hydrolase activity prephenate dehydrogenase activity inositol tetrakisphosphate 1-kinase activity inositol-1,3,4-trisphosphate 5-kinase activity inositol-1,3,4-trisphosphate 6-kinase activity cinnamoyl-CoA reductase activity geranyltranstransferase activity farnesyltranstransferase activity sporopollenin biosynthetic process acyl-CoA hydrolysis lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3) L-tyrosine biosynthesis II proanthocyanidins biosynthesis from flavanols Glycine, serine and threonine metabolism sexual reproduction triglyceride biosynthetic process carotenoid biosynthetic process dimethylallyltranstransferase activity diacylglycerol O-acyltransferase activity anthocyanin biosynthesis polyisoprenoid biosynthesis trans, trans-farnesyl diphosphate biosynthesis geranylgeranyl diphosphate biosynthesis lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3) superpathway of geranylgeranyl diphosphate biosynthesis II (via MEP) superpathway of geranylgeranyldiphosphate biosynthesis I (via mevalonate) Transcription_related, Transcription factor: NF-YA inositol pyrophosphates biosynthesis Nicotinate and nicotinamide metabolism O-acyltransferase activity Cytochrome_P450, Cytochrome P450: CYP81D potassium ion transmembrane transporter activity indole glucosinolate metabolic process phospholipid remodeling (phosphatidylcholine, yeast) defense response to other organism Fatty acid elongation extracellular region metal ion binding 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza) sesamin biosynthesis stromule cutin biosynthesis potassium ion transmembrane transport transmembrane transporter activity plant-type cell wall organization Inositol phosphate metabolism Terpenoid backbone biosynthesis coenzyme binding suberin monomers biosynthesis Biosynthesis of amino acids secondary metabolite biosynthetic process defense response oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | details |
| CFinderADM000413 | O-acetyltransferase activity cell wall organization or biogenesis 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity regulation of energy homeostasis Golgi apparatus myo-inositol:proton symporter activity adenylate kinase activity myo-inositol transport abscisic acid biosynthesis methylerythritol phosphate pathway I methylerythritol phosphate pathway II chloroplast stroma oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen nucleotide phosphorylation isoprenoid biosynthetic process adenosine ribonucleotides de novo biosynthesis glucose transmembrane transport transmembrane transporter activity glucose transmembrane transporter activity sugar:proton symporter activity glucose import Carotenoid biosynthesis proton transport Terpenoid backbone biosynthesis Purine metabolism integral component of plasma membrane | details |
| CFinderADM000765 | formation of glycosidic bonds, GlycosylTransferases: GTnc regulation of GTPase activity amylopectin biosynthetic process alpha-1,4-glucan synthase activity starch synthase activity glycogen (starch) synthase activity starch biosynthesis starch biosynthetic process amyloplast signal transduction Starch and sucrose metabolism chloroplast stroma zinc ion binding | details |
| CFinderADM000846 | myo-inositol:proton symporter activity myo-inositol transport sugar:proton symporter activity O-acetyltransferase activity glucose transmembrane transporter activity cysteine-type endopeptidase activity cell wall organization or biogenesis glucose transmembrane transport glucose import extracellular space Lysosome proton transport proteolysis involved in cellular protein catabolic process Golgi apparatus integral component of plasma membrane | details |
| CFinderADM001549 | DNA replication DNA recombination Transcription_related, Transcription factor: C2H2 DNA repair | details |
| CFinderADM001999 | catalytic complex intracellular non-membrane-bounded organelle nuclear lumen 1-aminocyclopropane-1-carboxylate oxidase activity developmental process involved in reproduction fruit ripening ethylene biosynthetic process ethylene biosynthesis I (plants) peptidyl-lysine monomethylation protein-lysine N-methyltransferase activity Transcription_related, Transcription regulator: SET L-ascorbic acid binding Fanconi anemia pathway Cysteine and methionine metabolism response to stimulus metal ion transport metal ion binding multicellular organism development dioxygenase activity cellular process | details |
| CFinderADM002203 | regulation of secondary cell wall biogenesis xylem development FAD binding negative regulation of transcription, DNA-templated Transcription_related, Transcription factor: HB secondary metabolite biosynthetic process monooxygenase activity DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |