CFinderADM002203's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of secondary cell wall biogenesis | 1.38E-05 | GO:2000652 |
| xylem development | 2.42E-05 | GO:0010089 |
| FAD binding | 6.35E-05 | GO:0071949 |
| negative regulation of transcription, DNA-templated | 0.000160669 | GO:0045892 |
| Transcription_related, Transcription factor: HB | 0.000664232 | TF family |
| secondary metabolite biosynthetic process | 0.001887412 | GO:0044550 |
| monooxygenase activity | 0.004967453 | GO:0004497 |
| DNA binding | 0.042971673 | GO:0003677 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000852 | AT2G29720 (4.00E-145) | CTF2B|FAD/NAD(P)-binding oxidoreductase family protein |
| CRO_T007304 | AT3G18730 (0) | BRU1|BRUSHY1; MGO3|MGOUN3; TSK|TONSOKU |
| CRO_T009213 | AT5G52910 (0) | ATIM|TIMELESS |
| CRO_T028479 | AT5G25580 (9.00E-70) | |
| CRO_T029196 | AT1G62990 (2.00E-131) | KNAT7|KNOTTED-like homeobox of 7 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001112 | myo-inositol transport myo-inositol:proton symporter activity glucose transmembrane transporter activity transmembrane transporter activity sugar:proton symporter activity glucose transmembrane transport glucose import proton transport integral component of plasma membrane transmembrane transport zinc ion binding | details |
| CFinderADM001549 | DNA replication DNA recombination Transcription_related, Transcription factor: C2H2 DNA repair | details |
| CFinderADM001999 | catalytic complex intracellular non-membrane-bounded organelle nuclear lumen 1-aminocyclopropane-1-carboxylate oxidase activity developmental process involved in reproduction fruit ripening ethylene biosynthetic process ethylene biosynthesis I (plants) peptidyl-lysine monomethylation protein-lysine N-methyltransferase activity Transcription_related, Transcription regulator: SET L-ascorbic acid binding Fanconi anemia pathway Cysteine and methionine metabolism response to stimulus metal ion transport metal ion binding multicellular organism development dioxygenase activity cellular process | details |
Expression profiles
 Show details about module gene expression profiling |