CFinderADM001144's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| pyrimidine nucleoside salvage | 3.07E-05 | GO:0043097 |
| pyrimidine nucleobase metabolic process | 3.07E-05 | GO:0006206 |
| vesicle docking involved in exocytosis | 4.44E-05 | GO:0006904 |
| pyrimidine ribonucleosides salvage I | 5.10E-05 | plantCyc |
| uridine kinase activity | 5.19E-05 | GO:0004849 |
| xylogalacturonan biosynthesis | 9.01E-05 | plantCyc |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000147759 | cazy family |
| exocyst | 0.000681338 | GO:0000145 |
| membrane part | 0.000681338 | GO:0044425 |
| phosphorylation | 0.007655888 | GO:0016310 |
| RNA binding | 0.014197455 | GO:0003723 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008993 | AT1G64810 (1.00E-75) | APO1|ACCUMULATION OF PHOTOSYSTEM ONE 1 |
| CRO_T011631 | AT4G38040 (3.00E-23) | Exostosin family protein |
| CRO_T020712 | - | - |
| CRO_T023574 | AT1G03030 (4.00E-98) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T032682 | AT3G56640 (0) | SEC15A|exocyst complex component sec15A |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM001230 | Sec61 translocon complex formation of glycosidic bonds, GlycosylTransferases: GTnc xylogalacturonan biosynthesis Protein export very long chain fatty acid biosynthesis I intracellular protein transport Golgi apparatus RNA binding integral component of membrane | details |
| CFinderADM001231 | flavin-linked sulfhydryl oxidase activity rRNA (uridine-2'-O-)-methyltransferase activity enzyme-directed rRNA 2'-O-methylation pyrimidine nucleoside salvage pyrimidine nucleobase metabolic process pyrimidine ribonucleosides salvage I RNA binding uridine kinase activity xylogalacturonan biosynthesis integral component of Golgi membrane cullin-RING ubiquitin ligase complex protein disulfide isomerase activity Ubiquitin_Proteasome_system, E3 adaptor: Cullin Circadian rhythm - plant formation of glycosidic bonds, GlycosylTransferases: GTnc ubiquitin protein ligase binding extracellular space protein ubiquitination involved in ubiquitin-dependent protein catabolic process Ubiquitin mediated proteolysis ubiquitin protein ligase activity cell redox homeostasis protein folding Ubiquitin_Proteasome_system, E3 adaptor: F-box phosphorylation | details |
| CFinderADM001408 | phosphatidylinositol-4,5-bisphosphate binding GTP-Rho binding exocyst localization Golgi to plasma membrane transport Peroxisome vindoline and vinblastine biosynthesis exocytosis exocyst membrane part vesicle-mediated transport dioxygenase activity vacuolar membrane endoplasmic reticulum | details |
| CFinderADM001442 | nucleosome assembly nucleosome membrane part GTPase activity GTP binding | details |
Expression profiles
 Show details about module gene expression profiling |