CFinderADM001178's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phytanoyl-CoA dioxygenase activity | 6.90E-06 | GO:0048244 |
| methylated histone binding | 6.90E-06 | GO:0035064 |
| root morphogenesis | 1.15E-05 | GO:0010015 |
| response to molecule of bacterial origin | 1.15E-05 | GO:0002237 |
| Ubiquitin_Proteasome_system, DUB: USP | 8.88E-05 | ubs family |
| cysteine-type peptidase activity | 9.19E-05 | GO:0008234 |
| Peroxisome | 0.000139572 | KEGG pathway |
| zinc ion binding | 0.00019846 | GO:0008270 |
| cellular protein metabolic process | 0.000310235 | GO:0044267 |
| proteolysis | 0.012497744 | GO:0006508 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001489 | AT3G24010 (2.00E-25) | ATING1|INHIBITOR OF GROWTH 1 |
| CRO_T002023 | AT3G05010 (1.00E-104) | Cand2|candidate G-protein Coupled Receptor 2 |
| CRO_T013197 | AT2G45530 (7.00E-08) | RING/U-box superfamily protein |
| CRO_T022684 | AT2G01490 (1.00E-119) | PAHX|phytanoyl-CoA 2-hydroxylase |
| CRO_T027862 | AT5G10790 (6.00E-108) | UBP22|ubiquitin-specific protease 22 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000832 | cellular protein metabolic process translational elongation Ubiquitin_Proteasome_system, DUB: USP cysteine-type peptidase activity translation elongation factor activity nucleotidyltransferase activity helicase activity GTPase activity intracellular proteolysis formation of glycosidic bonds, GlycosylTransferases: GTnc Ubiquitin_Proteasome_system, E3 adaptor: DWD GTP binding | details |
| CFinderADM000839 | heme a biosynthetic process respiratory chain complex IV assembly oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor methylated histone binding seleno-amino acid biosynthesis oxidoreductase activity, acting on the CH-CH group of donors cysteine biosynthetic process from serine cytochrome-c oxidase activity hydrogen ion transmembrane transport pyridoxal phosphate binding mitochondrial inner membrane Carbon metabolism Oxidative phosphorylation | details |
| CFinderADM002277 | asparaginyl-tRNA aminoacylation asparagine-tRNA ligase activity Hedgehog signaling pathway cell morphogenesis Ubiquitin_Proteasome_system, SOCS/VHL/BC-box: 3-box Transcription_related, Transcription regulator: TRAF cysteine-type peptidase activity Ubiquitin_Proteasome_system, DUB: USP cellular protein metabolic process Aminoacyl-tRNA biosynthesis Ubiquitin_Proteasome_system, E3 adaptor: BTB proteolysis nucleic acid binding | details |
Expression profiles
 Show details about module gene expression profiling |