CFinderADM001181's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| transcription factor import into nucleus | 3.47E-06 | GO:0042991 |
| nuclear envelope | 0.000350458 | GO:0005635 |
| Ran GTPase binding | 0.000430943 | GO:0008536 |
| protein transporter activity | 0.001124158 | GO:0008565 |
| Transcription_related, Transcription factor: NAC | 0.003169587 | TF family |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.016752141 | cazy family |
| transcription, DNA-templated | 0.01757171 | GO:0006351 |
| Ubiquitin_Proteasome_system, E3: RING | 0.019155007 | ubs family |
| regulation of transcription, DNA-templated | 0.0344748 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004291 | AT2G18650 (2.00E-19) | MEE16|maternal effect embryo arrest 16 |
| CRO_T011596 | AT3G08960 (0) | ARM repeat superfamily protein |
| CRO_T011618 | AT3G56830 (3.00E-42) | Protein of unknown function (DUF565) |
| CRO_T018388 | AT1G01720 (3.00E-94) | ANAC002|Arabidopsis NAC domain containing protein 2 |
| CRO_T031168 | AT1G62930 (1.00E-53) | RPF3|RNA processing factor 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000359 | Transcription_related, Transcription factor: WRKY mitochondrial respiratory chain AP-3 adaptor complex mitochondrial membrane beta-amyrin synthase activity pentacyclic triterpenoid biosynthetic process mitochondrial transport mangrove triterpenoid biosynthesis oleanolate biosynthesis chlorophyll catabolic process cytochrome complex assembly Lysosome Sesquiterpenoid and triterpenoid biosynthesis Transcription_related, Transcription factor: NAC regulation of transcription, DNA-templated vesicle-mediated transport protein transporter activity MAPK signaling pathway - plant intracellular protein transport Spliceosome Golgi apparatus | details |
| CFinderADM001917 | transcription factor import into nucleus peptide metabolic process Transcription_related, Transcription factor: BES1 3'-5' DNA helicase activity brassinosteroid mediated signaling pathway intracellular organelle nuclear envelope ATP-dependent helicase activity DNA recombination Ran GTPase binding metalloendopeptidase activity protein transporter activity Homologous recombination Plant hormone signal transduction Purine metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc chloroplast thylakoid membrane proteolysis transcription factor activity, sequence-specific DNA binding transcription, DNA-templated nucleic acid binding | details |
| CFinderADM002262 | transcription factor import into nucleus hydrolysis of carbohydrate esters, Carbohydrate Esterases: CE8 Wnt signaling pathway nuclear envelope Ran GTPase binding integral component of membrane protein transporter activity hydrolase activity cytosol | details |
Expression profiles
 Show details about module gene expression profiling |