CFinderADM001211's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| phospholipid remodeling (phosphatidylcholine, yeast) | 0.000218907 | plantCyc |
| cell wall biogenesis | 0.000303542 | GO:0042546 |
| xyloglucan metabolic process | 0.000303542 | GO:0010411 |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.000344152 | cazy family |
| Glycerophospholipid metabolism | 0.000373086 | KEGG pathway |
| phosphatidylcholine acyl editing | 0.000413391 | plantCyc |
| phospholipases | 0.000413391 | plantCyc |
| Ubiquitin_Proteasome_system, E3 adaptor: BTB | 0.000555337 | ubs family |
| xyloglucan:xyloglucosyl transferase activity | 0.000570382 | GO:0016762 |
| cell wall organization | 0.002654634 | GO:0071555 |
| hydrolase activity, hydrolyzing O-glycosyl compounds | 0.003784671 | GO:0004553 |
| apoplast | 0.005519855 | GO:0048046 |
| cell wall | 0.008271076 | GO:0005618 |
| hydrolase activity | 0.016806044 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T020456 | AT2G06925 (4.00E-44) | ATSPLA2-ALPHA|PHOSPHOLIPASE A2-ALPHA |
| CRO_T027462 | - | - |
| CRO_T029549 | AT3G50780 (4.00E-96) | |
| CRO_T029937 | AT5G65730 (1.00E-76) | XTH6|xyloglucan endotransglucosylase/hydrolase 6 |
| CRO_T031393 | AT2G30010 (5.00E-131) | TBL45|TRICHOME BIREFRINGENCE-LIKE 45 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000709 | Transcription_related, Transcription factor: HB Ubiquitin_Proteasome_system, E3 adaptor: BTB aspartic-type endopeptidase activity apoplast sequence-specific DNA binding proteolysis transport | details |
| CFinderADM000710 | aspartic-type endopeptidase activity apoplast proteolysis integral component of membrane | details |
| CFinderADM000747 | outer membrane-bounded periplasmic space Mismatch repair phosphatidate metabolism, as a signaling molecule adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 cytochrome complex assembly cellulose catabolic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc cellulase activity ATPase activity Protein processing in endoplasmic reticulum transport transporter activity phosphorylation kinase activity | details |
| CFinderADM000986 | serine-type endopeptidase activity proteolysis transport | details |
| CFinderADM001332 | signaling receptor activity protein histidine kinase activity Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase formation of glycosidic bonds, GlycosylTransferases: GTnc protein autophosphorylation phosphorelay signal transduction system membrane part MAPK signaling pathway - plant adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 intracellular plasmodesma protein serine/threonine kinase activity protein phosphorylation integral component of membrane | details |
| CFinderADM001677 | benzoyl-β-D-glucopyranose biosynthesis salicylate glucosides biosynthesis IV galactosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc protein glycosylation quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity flavonoid glucuronidation flavonoid biosynthetic process carbohydrate binding intracellular membrane-bounded organelle Golgi apparatus integral component of membrane | details |
| CFinderADM001856 | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) UDP-D-apiose biosynthesis (from UDP-D-glucuronate) RNA-3'-phosphate cyclase activity RNA binding UDP-glucuronate decarboxylase activity endoribonuclease activity UDP-D-xylose biosynthesis UDP-sugars interconversion coenzyme binding Amino sugar and nucleotide sugar metabolism Ribosome biogenesis in eukaryotes nucleolus | details |
Expression profiles
 Show details about module gene expression profiling |