CFinderADM001220's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cellular transition metal ion homeostasis | 0.000996163 | GO:0046916 |
| metal ion transport | 0.000996163 | GO:0030001 |
| transition metal ion binding | 0.001897902 | GO:0046914 |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.006152893 | kinase family |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.01409218 | ubs family |
| kinase activity | 0.018436741 | GO:0016301 |
| oxidoreductase activity | 0.032494016 | GO:0016491 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008338 | - | - |
| CRO_T011891 | AT5G26690 (4.00E-12) | Heavy metal transport/detoxification superfamily protein |
| CRO_T012579 | AT3G47580 (1.00E-54) | Leucine-rich repeat protein kinase family protein |
| CRO_T018588 | AT3G06240 (6.00E-18) | F-box family protein |
| CRO_T023783 | AT5G54300 (7.00E-14) | Protein of unknown function (DUF761) |
| CRO_T028096 | AT3G29250 (8.00E-64) | SDR4|short-chain dehydrogenase reductase 4 |
| CRO_T028101 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000362 | cellular transition metal ion homeostasis metal ion transport transition metal ion binding MAPK signaling pathway - plant Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Ubiquitin_Proteasome_system, E3: U-box protein ubiquitination ubiquitin-protein transferase activity kinase activity | details |
| CFinderADM000877 | Golgi apparatus Thyroid hormone signaling pathway positive regulation of translational elongation positive regulation of translational termination translational frameshifting xylan biosynthetic process glucuronosyltransferase activity plant-type secondary cell wall biogenesis mediator complex formation of glycosidic bonds, GlycosylTransferases: GTnc ribosome binding O-acetyltransferase activity translation elongation factor activity cell wall organization or biogenesis translational initiation translation initiation factor activity kinase activity phosphorylation Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001028 | Nucleotide excision repair response to radiation central vacuole oxidoreductase activity, acting on the CH-CH group of donors glycerol channel activity endonuclease activity water channel activity damaged DNA binding glycerol transport water transport cellular water homeostasis ion transmembrane transport plant-type vacuole membrane nucleic acid phosphodiester bond hydrolysis DNA repair lipid metabolic process integral component of plasma membrane nucleic acid binding | details |
| CFinderADM001494 | positive regulation of translational termination positive regulation of translational elongation translational frameshifting ribosome binding translation elongation factor activity Transcription_related, Transcription factor: C2C2-GATA translational initiation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc translation initiation factor activity Transcription_related, Transcription factor: C2H2 | details |
| CFinderADM001769 | BLOC-1 complex eugenol and isoeugenol biosynthesis volatile benzenoid biosynthesis I (ester formation) hydrogen peroxide catabolic process Phenylpropanoid biosynthesis transferase activity, transferring acyl groups other than amino-acyl groups response to oxidative stress cellular oxidant detoxification peroxidase activity extracellular region heme binding | details |
Expression profiles
 Show details about module gene expression profiling |