CFinderADM000362's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cellular transition metal ion homeostasis | 0.002468935 | GO:0046916 |
| metal ion transport | 0.002468935 | GO:0030001 |
| transition metal ion binding | 0.004704216 | GO:0046914 |
| MAPK signaling pathway - plant | 0.004727084 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.006333864 | kinase family |
| Ubiquitin_Proteasome_system, E3: U-box | 0.006333864 | ubs family |
| protein ubiquitination | 0.015591548 | GO:0016567 |
| ubiquitin-protein transferase activity | 0.01836958 | GO:0004842 |
| kinase activity | 0.030130542 | GO:0016301 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002014 | AT1G55340 (2.00E-19) | Protein of unknown function (DUF1639) |
| CRO_T004504 | - | - |
| CRO_T010470 | - | - |
| CRO_T011891 | AT5G26690 (4.00E-12) | Heavy metal transport/detoxification superfamily protein |
| CRO_T012579 | AT3G47580 (1.00E-54) | Leucine-rich repeat protein kinase family protein |
| CRO_T014068 | - | - |
| CRO_T024072 | - | - |
| CRO_T028096 | AT3G29250 (8.00E-64) | SDR4|short-chain dehydrogenase reductase 4 |
| CRO_T033770 | AT3G52450 (6.00E-48) | PUB22|plant U-box 22 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000472 | details | |
| CFinderADM000691 | oxidoreductase activity deadenylation-independent decapping of nuclear-transcribed mRNA deadenylation-dependent decapping of nuclear-transcribed mRNA enzyme activator activity transmembrane receptor protein kinase activity positive regulation of catalytic activity Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase cytoplasmic mRNA processing body mRNA binding FMN binding ribosome biogenesis mRNA splicing, via spliceosome signal transduction GTPase activity Ribosome biogenesis in eukaryotes RNA degradation nucleolus | details |
| CFinderADM001220 | cellular transition metal ion homeostasis metal ion transport transition metal ion binding Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII Ubiquitin_Proteasome_system, E3 adaptor: F-box kinase activity oxidoreductase activity | details |
| CFinderADM001842 | carbamoyl-phosphate synthase complex positive regulation of translational termination translational frameshifting positive regulation of translational elongation urea cycle L-arginine biosynthesis I (via L-ornithine) UMP biosynthesis I ornithine-citrulline shuttle L-arginine biosynthesis II (acetyl cycle) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity L-glutamine degradation I 'de novo' pyrimidine nucleobase biosynthetic process arginine biosynthetic process glutamine metabolic process vesicle docking Pyrimidine metabolism SNARE interactions in vesicular transport vesicle fusion translation elongation factor activity SNAP receptor activity ribosome binding SNARE binding translational initiation SNARE complex translation initiation factor activity endomembrane system intracellular protein transport chloroplast stroma | details |
Expression profiles
 Show details about module gene expression profiling |